HHsearch alignment for GI: 254780334 and conserved domain: COG1435

>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism].
Probab=97.55  E-value=0.00089  Score=47.08  Aligned_cols=151  Identities=21%  Similarity=0.218  Sum_probs=103.0

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC-CCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHCC
Q ss_conf             7870899954987518899999999985039819999864-630478888752015775100003478899999997316
Q gi|254780334|r   88 VRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGE-EAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNE  166 (479)
Q Consensus        88 ~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~E-Es~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~~  166 (479)
T Consensus         2 ~~g~l~~i~gpM~SGKT~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~~V~Sr~G~~~~A~~i~~~~~i~~~i~~~~~~~   81 (201)
T COG1435           2 KMGWLEFIYGPMFSGKTEELLRRARRYKEAGMKVLVFKPAIDTRYGVGKVSSRIGLSSEAVVIPSDTDIFDEIAALHEKP   81 (201)
T ss_pred             CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCCCCCEECCCHHHHHHHHHHCCCCC
T ss_conf             44789999715768635999999999997598089985253353564336531587665356387578999998513478


Q ss_pred             CCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECC--CCCCCCHHHHHHHHHEEE------
Q ss_conf             982899721687665420445563679999999999975307978999863036--654331145787753027------
Q gi|254780334|r  167 KPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTK--EGQIAGPRVIEHMVDAVL------  238 (479)
Q Consensus       167 ~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK--~G~iAGp~~LeH~VD~vl------  238 (479)
T Consensus        82 ~~~~v~IDEaQF~~~--------------~~v~~l~~lad~lgi~Vi~~GL~~DFrgepFe~s~~Lla~ADkv~kL~aIC  147 (201)
T COG1435          82 PVDCVLIDEAQFFDE--------------ELVYVLNELADRLGIPVICYGLDTDFRGEPFEGSKYLLAIADKVTKLKAIC  147 (201)
T ss_pred             CCCEEEEEHHHHCCH--------------HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             757899961671897--------------899999999861498899954465313287844899999987899988889


Q ss_pred             EEECCCCCCCCCCEEEEEE
Q ss_conf             8515556665442156763
Q gi|254780334|r  239 YFEGGTRNTQYDYRILRSV  257 (479)
Q Consensus       239 ~~ege~~~~~~~~R~Lr~~  257 (479)
T Consensus       148 ~~Cg~~-----At~~~Rl~  161 (201)
T COG1435         148 NVCGRK-----ATRTLRLI  161 (201)
T ss_pred             HHHCCC-----CEEEEEEC
T ss_conf             875881-----06998841