HHsearch alignment for GI: 254780334 and conserved domain: COG1750
>COG1750 Archaeal serine proteases [General function prediction only].
Probab=99.04 E-value=9.4e-09 Score=83.42 Aligned_cols=155 Identities=20% Similarity=0.215 Sum_probs=126.9
Q ss_pred CCCCCEEEEEEEECCCCCCCCEEEEECCCHHHH--------HHHHHHHHHHCCCCCCCCHHHEECCCCCCCCC-CCCCHH
Q ss_conf 897411553310115778772477604686665--------55589887511110246222100145611154-325879
Q gi|254780334|r 306 GTRALLVEIQSLVVPTSLGMPRRTVVGWDSSRL--------AMILAVLEARCNIKFGNHDVHLNIAGGYRISE-PAADVA 376 (479)
Q Consensus 306 G~r~~lvEvQALv~~~~~~~p~R~~~G~d~~rl--------~~llAvl~k~~~~~~~~~Di~~nv~gG~~i~~-pa~DLa 376 (479)
T Consensus 44 ~g~~~gv~~~~~vtv-~pG~G~v~v~t~P~t~~d~~~SArvAa~~A--~~~~Gvd~ssyd~~i~v~a~~pVVGgPSagg~ 120 (579)
T COG1750 44 QGQGVGVPINISVTV-TPGDGRVYVATFPYTQIDMQGSARVAAGVA--LRLAGVDMSSYDVYIAVEADSPVVGGPSAGGY 120 (579)
T ss_pred CCCCCEEEEEEEEEE-CCCCCEEEEECCCCCHHCCCHHHHHHHHHH--HHHHCCCCCCEEEEEEEECCCCEECCCCCCHH
T ss_conf 377630231026665-289863886367774002213457888877--88627875322589999437974358651007
Q ss_pred HHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHCCCCEEEECHHHHH-----H-CCCCCEEEEEECCH
Q ss_conf 99999997248868878599987424731634078899999999769989997757653-----2-28588089983839
Q gi|254780334|r 377 VAAALISSILSIPLPSDFVYFGEVSLSGSVRAVGHMQQRLKEAEKIGFLSGVFPESAKG-----E-CKIGMLDRQYIKNL 450 (479)
Q Consensus 377 ia~ailSs~~~~~~~~~~~~~GEl~L~GeIR~V~~i~~ri~eA~~~G~~~~iiP~~n~~-----e-~~~~~i~i~~v~~l 450 (479)
T Consensus 121 mtva~~~~~~~~~~~~~v~mTG~I~PDgsigpVGGi~~K~~AA~~~g~kifLIP~Gq~~~~d~~~Y~k~~gl~vieV~~~ 200 (579)
T COG1750 121 MTVAIYAALMGWSIRKDVMMTGMINPDGSIGPVGGILEKLEAAAKAGAKIFLIPVGQRIVVDLVEYGKSLGLKVIEVGTL 200 (579)
T ss_pred HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCEEEEEEECH
T ss_conf 59999999957885467056523558874334544588899998579859996055444530787776426479997002
Q ss_pred HHHHHHHHCCCCC
Q ss_conf 9999986147643
Q gi|254780334|r 451 SDLVKKITALQKK 463 (479)
Q Consensus 451 ~e~i~~l~~~~~~ 463 (479)
T Consensus 201 ~~aiyy~tg~~~e 213 (579)
T COG1750 201 EDAAYYLTGPQIE 213 (579)
T ss_pred HHHHHHHCCCCCC
T ss_conf 2103454166678