HHsearch alignment for GI: 254780334 and conserved domain: COG4178
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only].
Probab=97.53 E-value=0.00098 Score=46.78 Aligned_cols=142 Identities=20% Similarity=0.293 Sum_probs=76.2
Q ss_pred CCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH-------C-CCCCEEEEECCCCHHHHHHH---------
Q ss_conf 781248888659857870899954987518899999999985-------0-39819999864630478888---------
Q gi|254780334|r 74 THIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLA-------Y-KKHRITYVSGEEAIGQIRLR--------- 136 (479)
Q Consensus 74 TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a-------~-~g~~vlYvS~EEs~~Qi~~R--------- 136 (479)
T Consensus 407 ~ll~~l~~----~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~ 482 (604)
T COG4178 407 TLLSELNF----EVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAA 482 (604)
T ss_pred EEECCCEE----EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCEEEECCCCCCCCCCHHHHHHCCCCC
T ss_conf 42146526----54799879987899987889999996458567874416898755771488777876589998089997
Q ss_pred --------------------HHHCCCCCCCHHEECCCCHHHH-HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHH
Q ss_conf --------------------7520157751000034788999-9999731698289972168766542044556367999
Q gi|254780334|r 137 --------------------AQRLNTINSSVYIAIETNVEDI-IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVR 195 (479)
Q Consensus 137 --------------------a~Rl~~~~~~i~~~~e~~l~~i-l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvr 195 (479)
T Consensus 483 ~~~~d~~l~~vL~~vgL~~L~~rl~~~~~W~~vLS~GEqQRlafAR-ilL~kP~~v~LDEAT----sALD---------e 548 (604)
T COG4178 483 PDFSDAELVAVLHKVGLGDLAERLDEEDRWDRVLSGGEQQRLAFAR-LLLHKPKWVFLDEAT----SALD---------E 548 (604)
T ss_pred CCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHH-HHHCCCCEEEEECCH----HCCC---------H
T ss_conf 7799599999999819198999873327576645852789999999-997099989980601----1259---------5
Q ss_pred HHHHHHHHHHHH--CCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEEC
Q ss_conf 999999997530--79789998630366543311457877530278515
Q gi|254780334|r 196 TSVQAMIQYAKK--NGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFEG 242 (479)
Q Consensus 196 e~~~~L~~~AK~--~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~eg 242 (479)
T Consensus 549 ~~e~~l~q~l~~~lp~~tvISV~Hr~t---------l~~~h~~~l~l~~ 588 (604)
T COG4178 549 ETEDRLYQLLKEELPDATVISVGHRPT---------LWNFHSRQLELLD 588 (604)
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHH---------HHHHHHHHEEECC
T ss_conf 789999999985489978999556000---------5788754323114