HHsearch alignment for GI: 254780334 and conserved domain: COG4608

>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism].
Probab=97.87  E-value=0.0003  Score=50.59  Aligned_cols=137  Identities=15%  Similarity=0.171  Sum_probs=86.1

Q ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC--------CCHHHHHHHHHHCCCCCCCHHE----ECCC
Q ss_conf             857870899954987518899999999985039819999864--------6304788887520157751000----0347
Q gi|254780334|r   86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGE--------EAIGQIRLRAQRLNTINSSVYI----AIET  153 (479)
Q Consensus        86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~E--------Es~~Qi~~Ra~Rl~~~~~~i~~----~~e~  153 (479)
T Consensus        35 ~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~-i~f~g~~i~~~~~~~~~~~v~elL~~Vgl~~~~~~ryPhelSGG  113 (268)
T COG4608          35 SIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGE-ILFEGKDITKLSKEERRERVLELLEKVGLPEEFLYRYPHELSGG  113 (268)
T ss_pred             EECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCE-EEECCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCH
T ss_conf             97589878999368887787999997283888726-99868531113666799999999998098877863388303731


Q ss_pred             CHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHH
Q ss_conf             88999999973169828997216876654204455636799999999999753079789998630366543311457877
Q gi|254780334|r  154 NVEDIIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHM  233 (479)
Q Consensus       154 ~l~~il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~  233 (479)
T Consensus       114 QrQRi~IARALal~P~liV~DEpvSaLDvSi--------q-aqIlnLL~~lq~~~~lt~lFIsHD--------l~vv~~i  176 (268)
T COG4608         114 QRQRIGIARALALNPKLIVADEPVSALDVSV--------Q-AQILNLLKDLQEELGLTYLFISHD--------LSVVRYI  176 (268)
T ss_pred             HHHHHHHHHHHHHCCCEEEECCCHHHCCHHH--------H-HHHHHHHHHHHHHHCCEEEEEEEE--------HHHHHHH
T ss_conf             3356999999850986797437211012467--------9-999999999999859758999877--------7766640


Q ss_pred             HHEEEEE
Q ss_conf             5302785
Q gi|254780334|r  234 VDAVLYF  240 (479)
Q Consensus       234 VD~vl~~  240 (479)
T Consensus       177 sdri~Vm  183 (268)
T COG4608         177 SDRIAVM  183 (268)
T ss_pred             CCCEEEE
T ss_conf             4447887