HHsearch alignment for GI: 254780334 and conserved domain: COG4618
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].
Probab=97.09 E-value=0.0099 Score=39.48 Aligned_cols=148 Identities=26% Similarity=0.382 Sum_probs=78.0
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH--HHCCCCCCCHHEEC------------
Q ss_conf 8578708999549875188999999999850398199998646304788887--52015775100003------------
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRA--QRLNTINSSVYIAI------------ 151 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra--~Rl~~~~~~i~~~~------------ 151 (479)
T Consensus 358 ~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~-VRLDga~-l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~ 435 (580)
T COG4618 358 ALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGS-VRLDGAD-LRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGE 435 (580)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCC-EEECCHH-HHCCCHHHHCCCCCCCCCCCEECCCCHHHHHHHCCC
T ss_conf 76588667887888765778999998113567873-7756264-512798885113172765430057719999873166
Q ss_pred CCCHHHH----------------------------------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCH
Q ss_conf 4788999----------------------------------------999973169828997216876654204455636
Q gi|254780334|r 152 ETNVEDI----------------------------------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTV 191 (479)
Q Consensus 152 e~~l~~i----------------------------------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~Gsv 191 (479)
T Consensus 436 ~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLAR-AlYG~P~lvVLDEPN----sNLD~~-G-- 507 (580)
T COG4618 436 EADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALAR-ALYGDPFLVVLDEPN----SNLDSE-G-- 507 (580)
T ss_pred CCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHCCCCCEEEECCCC----CCCCHH-H--
T ss_conf 68879999999873758999717687667657898877723789999999-970897089955898----776526-7--
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEEECCCCCCCEE
Q ss_conf 79999999999975307978999863036654331145787753027851555666544215676320256765127
Q gi|254780334|r 192 IQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFEGGTRNTQYDYRILRSVKNRFGPTDEIG 268 (479)
Q Consensus 192 sQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~ege~~~~~~~~R~Lr~~KNRfG~t~e~g 268 (479)
T Consensus 508 ---E~AL~~Ai~~~k~rG~~vvviaHR--------Ps~-L~~~Dkilvl~~G--------~~-----~~FG~r~eVL 559 (580)
T COG4618 508 ---EAALAAAILAAKARGGTVVVIAHR--------PSA-LASVDKILVLQDG--------RI-----AAFGPREEVL 559 (580)
T ss_pred ---HHHHHHHHHHHHHCCCEEEEEECC--------HHH-HHHCCEEEEECCC--------HH-----HHCCCHHHHH
T ss_conf ---999999999999769879999267--------778-8515534422388--------47-----7419778999