HHsearch alignment for GI: 254780334 and conserved domain: PRK04296

>PRK04296 thymidine kinase; Provisional.
Probab=97.20  E-value=0.0056  Score=41.28  Aligned_cols=136  Identities=21%  Similarity=0.275  Sum_probs=84.1

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC----CHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHC
Q ss_conf             708999549875188999999999850398199998646----3047888875201577510000347889999999731
Q gi|254780334|r   90 GSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE----AIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITN  165 (479)
Q Consensus        90 Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE----s~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~  165 (479)
T Consensus         2 g~L~~i~GpMfSGKTteLi~~~~~~~~~gkkvl~~kp~~D~Ry~~~~I~S---h~g~~~~~~~v~~~~~i~~~~~~~~~~   78 (197)
T PRK04296          2 AKLYFIYGAMNSGKSTELLQRAYNYEERGMKVLVFTPAIDDRYGEGKVVS---RIGLSREAILISSDTDIFELIEEEHEG   78 (197)
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEC---CCCCEEEEEEECCHHHHHHHHHHHHCC
T ss_conf             55999993427888999999999999879959999853446577785786---789834689948789999999876304


Q ss_pred             CCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECC--CCCCCCHHHHHHHHHEEEEEEC
Q ss_conf             6982899721687665420445563679999999999975307978999863036--6543311457877530278515
Q gi|254780334|r  166 EKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTK--EGQIAGPRVIEHMVDAVLYFEG  242 (479)
Q Consensus       166 ~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK--~G~iAGp~~LeH~VD~vl~~eg  242 (479)
T Consensus        79 ~~~dvI~IDEaQFf-~~---------~~i----~~~~~~~~~~~~~Viv~GLd~Df~~~~F~~~~~Li~~Ad~V~kl~a  143 (197)
T PRK04296         79 GKIDCVLIDEAQFL-DK---------EQV----VQLAEVVDDLGIPVICYGLDTDFRGEPFEGSPYLLALADKVTELKA  143 (197)
T ss_pred             CCCCEEEECCHHCC-CH---------HHH----HHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEE
T ss_conf             78568997202127-98---------999----9999999831858999765033024865439999972680999743