HHsearch alignment for GI: 254780334 and conserved domain: PRK04841

Probab=97.44  E-value=0.0056  Score=41.29  Aligned_cols=123  Identities=20%  Similarity=0.226  Sum_probs=64.8

Q ss_pred             HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHC----C----CCCCCH-HE
Q ss_conf             88886598578708999549875188999999999850398199998646304788887520----1----577510-00
Q gi|254780334|r   79 LDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRL----N----TINSSV-YI  149 (479)
Q Consensus        79 LDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl----~----~~~~~i-~~  149 (479)
T Consensus        22 L~~~L~~-~~~~~l~lv~APaG~GKTtl~a~w~~----~~~~~~Wlsld~~d~~~~~f~~~l~~al~~~~~~~~~~~~~~   96 (903)
T PRK04841         22 LLAKLSG-ANNYRLVLVRSPAGYGKTTLASQWAA----GKNNVGWYSLDESDNQPERFASYLIAALQQATNGHCSKSEAL   96 (903)
T ss_pred             HHHHHHH-HCCCCEEEEECCCCCCHHHHHHHHHH----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHC
T ss_conf             9999985-15899799977999889999999983----499859985885448999999999999998565433112311


Q ss_pred             E---CCCCHHH----HHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             0---3478899----999997316982899721687665420445563679999999999975307978999863
Q gi|254780334|r  150 A---IETNVED----IIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGH  217 (479)
Q Consensus       150 ~---~e~~l~~----il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~viligh  217 (479)
T Consensus        97 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~lvlDD~h~i~~~~----------~~~~l~~Ll~~~p-~~l~lvl~sR  160 (903)
T PRK04841         97 AEKRQYASLTSLFAQLFIELSDWHQPLYLVLDDYHLITNPE----------IHEAMRFFLRHQP-ENLTLVVLSR  160 (903)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHH----------HHHHHHHHHHHCC-CCEEEEEEEC
T ss_conf             35566554999999999997558998699986836488868----------9999999998389-8838998768