HHsearch alignment for GI: 254780334 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=98.34 E-value=9.4e-06 Score=61.53 Aligned_cols=165 Identities=16% Similarity=0.297 Sum_probs=96.7
Q ss_pred EECCCCCCCCCCCCCCCCHHHHHHHCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 0313334556663237812488886598-578708999549875188999999999850398199998646304788887
Q gi|254780334|r 59 FMLSEESIEEESRIQTHIDELDRVTGGG-FVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRA 137 (479)
Q Consensus 59 ~~l~~~~~~~~~Ri~TGi~eLDrvLGGG-l~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra 137 (479)
T Consensus 68 ktLe~fd~~~~~~l~~--~~i~~La~~~fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~-a 144 (254)
T PRK06526 68 KSLEEFDFDHQRSLKR--DTIAHLGTLDFVTGKENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFATAAQWVARLAA-A 144 (254)
T ss_pred CCHHHCCCCCCCCCCH--HHHHHHHCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH-H
T ss_conf 8987678656789899--999998637177658878998999986899999999999986996799877999999999-8
Q ss_pred HHCCCCCCCHHEECCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 52015775100003478899999997316982899721687665420445563679999999999975307978999863
Q gi|254780334|r 138 QRLNTINSSVYIAIETNVEDIIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGH 217 (479)
Q Consensus 138 ~Rl~~~~~~i~~~~e~~l~~il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~viligh 217 (479)
T Consensus 145 ~------------~~g~~~~~~~~---l~~~dLLIiDe~g~~--------~~~~~-~a~~lf~li~~Rye~~-S~IiTSn 199 (254)
T PRK06526 145 H------------HAGRLQDELVK---LGRIPLLIVDEVGYI--------PFEAE-AANLFFQLVSSRYERA-SLIVTSN 199 (254)
T ss_pred H------------HCCCHHHHHHH---HHCCCEEEEECCCCC--------CCCHH-HHHHHHHHHHHHHCCC-CEEEECC
T ss_conf 8------------55809999998---513687765021364--------47889-9999999999997458-8676658
Q ss_pred ECCC--CC-CCCHHHHHHHHHE------EEEEECCCCCCCCCCEEEEEEEECC
Q ss_conf 0366--54-3311457877530------2785155566654421567632025
Q gi|254780334|r 218 VTKE--GQ-IAGPRVIEHMVDA------VLYFEGGTRNTQYDYRILRSVKNRF 261 (479)
Q Consensus 218 vTK~--G~-iAGp~~LeH~VD~------vl~~ege~~~~~~~~R~Lr~~KNRf 261 (479)
T Consensus 200 ~~~~~W~~~f~D~~la~AilDRL~H~a~~i~~~G~------SyR~----k~r~ 242 (254)
T PRK06526 200 KPFGRWGEVFGDDVVAAAMIDRLVHHAEVISLKGD------SYRL----KDRD 242 (254)
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCC------CCCC----CCCC
T ss_conf 98668888648689999999986256289984388------6653----5576