HHsearch alignment for GI: 254780334 and conserved domain: PRK06526

>PRK06526 transposase; Provisional.
Probab=98.34  E-value=9.4e-06  Score=61.53  Aligned_cols=165  Identities=16%  Similarity=0.297  Sum_probs=96.7

Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
Q ss_conf             0313334556663237812488886598-578708999549875188999999999850398199998646304788887
Q gi|254780334|r   59 FMLSEESIEEESRIQTHIDELDRVTGGG-FVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRA  137 (479)
Q Consensus        59 ~~l~~~~~~~~~Ri~TGi~eLDrvLGGG-l~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra  137 (479)
T Consensus        68 ktLe~fd~~~~~~l~~--~~i~~La~~~fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~-a  144 (254)
T PRK06526         68 KSLEEFDFDHQRSLKR--DTIAHLGTLDFVTGKENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFATAAQWVARLAA-A  144 (254)
T ss_pred             CCHHHCCCCCCCCCCH--HHHHHHHCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH-H
T ss_conf             8987678656789899--999998637177658878998999986899999999999986996799877999999999-8


Q ss_pred             HHCCCCCCCHHEECCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             52015775100003478899999997316982899721687665420445563679999999999975307978999863
Q gi|254780334|r  138 QRLNTINSSVYIAIETNVEDIIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGH  217 (479)
Q Consensus       138 ~Rl~~~~~~i~~~~e~~l~~il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~viligh  217 (479)
T Consensus       145 ~------------~~g~~~~~~~~---l~~~dLLIiDe~g~~--------~~~~~-~a~~lf~li~~Rye~~-S~IiTSn  199 (254)
T PRK06526        145 H------------HAGRLQDELVK---LGRIPLLIVDEVGYI--------PFEAE-AANLFFQLVSSRYERA-SLIVTSN  199 (254)
T ss_pred             H------------HCCCHHHHHHH---HHCCCEEEEECCCCC--------CCCHH-HHHHHHHHHHHHHCCC-CEEEECC
T ss_conf             8------------55809999998---513687765021364--------47889-9999999999997458-8676658


Q ss_pred             ECCC--CC-CCCHHHHHHHHHE------EEEEECCCCCCCCCCEEEEEEEECC
Q ss_conf             0366--54-3311457877530------2785155566654421567632025
Q gi|254780334|r  218 VTKE--GQ-IAGPRVIEHMVDA------VLYFEGGTRNTQYDYRILRSVKNRF  261 (479)
Q Consensus       218 vTK~--G~-iAGp~~LeH~VD~------vl~~ege~~~~~~~~R~Lr~~KNRf  261 (479)
T Consensus       200 ~~~~~W~~~f~D~~la~AilDRL~H~a~~i~~~G~------SyR~----k~r~  242 (254)
T PRK06526        200 KPFGRWGEVFGDDVVAAAMIDRLVHHAEVISLKGD------SYRL----KDRD  242 (254)
T ss_pred             CCHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCC------CCCC----CCCC
T ss_conf             98668888648689999999986256289984388------6653----5576