HHsearch alignment for GI: 254780334 and conserved domain: PRK06731

Probab=97.99  E-value=5.5e-05  Score=55.90  Aligned_cols=98  Identities=15%  Similarity=0.255  Sum_probs=69.3

Q ss_pred             HHHHHHHCCC-C--CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC----CHHHHHHHHHHCCCCCCCHHE
Q ss_conf             2488886598-5--78708999549875188999999999850398199998646----304788887520157751000
Q gi|254780334|r   77 DELDRVTGGG-F--VRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE----AIGQIRLRAQRLNTINSSVYI  149 (479)
Q Consensus        77 ~eLDrvLGGG-l--~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE----s~~Qi~~Ra~Rl~~~~~~i~~  149 (479)
T Consensus        59 ~~l~~~~~~~~~~~~~~~vI~lvG~~G~GKTTT~AKLA~~~~~~~~kV~lia~DtyR~aA~eQLk~~a~~l~v~~~~--~  136 (270)
T PRK06731         59 EDMSSHFNTENVFEKEVQTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIA--V  136 (270)
T ss_pred             HHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEC--C
T ss_conf             99987507665467998189998889898899999999999867990899983888888999999999981995354--5


Q ss_pred             ECCCCHHHHHHHHHHCCCCCEEEECHH
Q ss_conf             034788999999973169828997216
Q gi|254780334|r  150 AIETNVEDIIATLITNEKPDLVIIDSI  176 (479)
Q Consensus       150 ~~e~~l~~il~~~i~~~~~~~vVIDSI  176 (479)
T Consensus       137 ~~~~~~~~~~~~~~~~~~~DvilIDTA  163 (270)
T PRK06731        137 RDEAAMTRALTYFKEEARVDYILIDTA  163 (270)
T ss_pred             CCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             887899999999999769999999799