HHsearch alignment for GI: 254780334 and conserved domain: PRK07004

>PRK07004 replicative DNA helicase; Provisional.
Probab=99.91  E-value=8.9e-23  Score=185.71  Aligned_cols=200  Identities=20%  Similarity=0.270  Sum_probs=145.3

Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCCEEEEECCCCHHHHHHHHH--HCCC--
Q ss_conf             666323781248888659857870899954987518899999999985-03981999986463047888875--2015--
Q gi|254780334|r   68 EESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLA-YKKHRITYVSGEEAIGQIRLRAQ--RLNT--  142 (479)
Q Consensus        68 ~~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a-~~g~~vlYvS~EEs~~Qi~~Ra~--Rl~~--  142 (479)
T Consensus       192 ~~~Gi~TGf~~LD~~t-~Gl~~gdLiIIAARPsmGKTafAlniA~n~A~~~g~~V~~FSLEMs~eql~~Rlls~~s~I~~  270 (460)
T PRK07004        192 DVTGTPTGFVDLDRMT-SGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVFSMEMPGTQLAMRMLGSVGRLDQ  270 (460)
T ss_pred             CCCCCCCCHHHHHHHH-CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCC
T ss_conf             9853867938898652-389877579997368764269999999999872588669984779999999999986069882


Q ss_pred             -----------------------CCCCHHEECCC--CHHHHHH---HHHHC-CCCCEEEECHHHHHHHHHHCCCCCCHHH
Q ss_conf             -----------------------77510000347--8899999---99731-6982899721687665420445563679
Q gi|254780334|r  143 -----------------------INSSVYIAIET--NVEDIIA---TLITN-EKPDLVIIDSIQTLWSQTAESSPGTVIQ  193 (479)
Q Consensus       143 -----------------------~~~~i~~~~e~--~l~~il~---~~i~~-~~~~~vVIDSIQtl~~~~~~s~~GsvsQ  193 (479)
T Consensus       271 ~~ir~g~l~~~e~~~i~~a~~~l~~~~l~IdD~~~lt~~~ira~~Rr~~~~~g~l~lvviDYlqli~~~~--~~~~r~~e  348 (460)
T PRK07004        271 HRMRTGRLTDEDWPKLTHAVQKMSEAQLFIDETGGLNPMELRSRARRLARQCGKLGLIIIDYLQLMSGSS--QGENRATE  348 (460)
T ss_pred             CHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCC--CCCCHHHH
T ss_conf             1100788999999999999999855974896898730789999999999743588899850775447888--88889999


Q ss_pred             HHHHHHHHHHHHHHCCCEEEEEEEECCCC-----------CCCCHHHHHHHHHEEEEEECCC-C---CCCCCCEEEEEEE
Q ss_conf             99999999997530797899986303665-----------4331145787753027851555-6---6654421567632
Q gi|254780334|r  194 VRTSVQAMIQYAKKNGVAMVLVGHVTKEG-----------QIAGPRVIEHMVDAVLYFEGGT-R---NTQYDYRILRSVK  258 (479)
Q Consensus       194 vre~~~~L~~~AK~~~i~vilighvTK~G-----------~iAGp~~LeH~VD~vl~~ege~-~---~~~~~~R~Lr~~K  258 (479)
T Consensus       349 i~~isr~lK~lAkel~ipvi~lsQLnR~~e~R~dkrP~lsDLReSGsIEQDADvV~fL~r~~~y~~~~~~~~~~e~ivaK  428 (460)
T PRK07004        349 ISEISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAEIIIGK  428 (460)
T ss_pred             HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEC
T ss_conf             99999999999999699789970468431227899875423202332032077899975410158998888816999973


Q ss_pred             ECCCCCCCEEEE
Q ss_conf             025676512799
Q gi|254780334|r  259 NRFGPTDEIGVF  270 (479)
Q Consensus       259 NRfG~t~e~gvf  270 (479)
T Consensus       429 ~R~G~~g~v~l~  440 (460)
T PRK07004        429 QRNGPIGPVRLT  440 (460)
T ss_pred             CCCCCCEEEEEE
T ss_conf             688996069999