HHsearch alignment for GI: 254780334 and conserved domain: PRK07004
>PRK07004 replicative DNA helicase; Provisional.
Probab=99.91 E-value=8.9e-23 Score=185.71 Aligned_cols=200 Identities=20% Similarity=0.270 Sum_probs=145.3
Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCCEEEEECCCCHHHHHHHHH--HCCC--
Q ss_conf 666323781248888659857870899954987518899999999985-03981999986463047888875--2015--
Q gi|254780334|r 68 EESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLA-YKKHRITYVSGEEAIGQIRLRAQ--RLNT-- 142 (479)
Q Consensus 68 ~~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a-~~g~~vlYvS~EEs~~Qi~~Ra~--Rl~~-- 142 (479)
T Consensus 192 ~~~Gi~TGf~~LD~~t-~Gl~~gdLiIIAARPsmGKTafAlniA~n~A~~~g~~V~~FSLEMs~eql~~Rlls~~s~I~~ 270 (460)
T PRK07004 192 DVTGTPTGFVDLDRMT-SGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVFSMEMPGTQLAMRMLGSVGRLDQ 270 (460)
T ss_pred CCCCCCCCHHHHHHHH-CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCC
T ss_conf 9853867938898652-389877579997368764269999999999872588669984779999999999986069882
Q ss_pred -----------------------CCCCHHEECCC--CHHHHHH---HHHHC-CCCCEEEECHHHHHHHHHHCCCCCCHHH
Q ss_conf -----------------------77510000347--8899999---99731-6982899721687665420445563679
Q gi|254780334|r 143 -----------------------INSSVYIAIET--NVEDIIA---TLITN-EKPDLVIIDSIQTLWSQTAESSPGTVIQ 193 (479)
Q Consensus 143 -----------------------~~~~i~~~~e~--~l~~il~---~~i~~-~~~~~vVIDSIQtl~~~~~~s~~GsvsQ 193 (479)
T Consensus 271 ~~ir~g~l~~~e~~~i~~a~~~l~~~~l~IdD~~~lt~~~ira~~Rr~~~~~g~l~lvviDYlqli~~~~--~~~~r~~e 348 (460)
T PRK07004 271 HRMRTGRLTDEDWPKLTHAVQKMSEAQLFIDETGGLNPMELRSRARRLARQCGKLGLIIIDYLQLMSGSS--QGENRATE 348 (460)
T ss_pred CHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCC--CCCCHHHH
T ss_conf 1100788999999999999999855974896898730789999999999743588899850775447888--88889999
Q ss_pred HHHHHHHHHHHHHHCCCEEEEEEEECCCC-----------CCCCHHHHHHHHHEEEEEECCC-C---CCCCCCEEEEEEE
Q ss_conf 99999999997530797899986303665-----------4331145787753027851555-6---6654421567632
Q gi|254780334|r 194 VRTSVQAMIQYAKKNGVAMVLVGHVTKEG-----------QIAGPRVIEHMVDAVLYFEGGT-R---NTQYDYRILRSVK 258 (479)
Q Consensus 194 vre~~~~L~~~AK~~~i~vilighvTK~G-----------~iAGp~~LeH~VD~vl~~ege~-~---~~~~~~R~Lr~~K 258 (479)
T Consensus 349 i~~isr~lK~lAkel~ipvi~lsQLnR~~e~R~dkrP~lsDLReSGsIEQDADvV~fL~r~~~y~~~~~~~~~~e~ivaK 428 (460)
T PRK07004 349 ISEISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAEIIIGK 428 (460)
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEC
T ss_conf 99999999999999699789970468431227899875423202332032077899975410158998888816999973
Q ss_pred ECCCCCCCEEEE
Q ss_conf 025676512799
Q gi|254780334|r 259 NRFGPTDEIGVF 270 (479)
Q Consensus 259 NRfG~t~e~gvf 270 (479)
T Consensus 429 ~R~G~~g~v~l~ 440 (460)
T PRK07004 429 QRNGPIGPVRLT 440 (460)
T ss_pred CCCCCCEEEEEE
T ss_conf 688996069999