HHsearch alignment for GI: 254780334 and conserved domain: PRK07165
>PRK07165 F0F1 ATP synthase subunit alpha; Validated.
Probab=97.33 E-value=0.0073 Score=40.43 Aligned_cols=170 Identities=15% Similarity=0.228 Sum_probs=102.2
Q ss_pred CCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH---HHHHCCCCCCC
Q ss_conf 632378124888865985787089995498751889999999998503981999986463047888---87520157751
Q gi|254780334|r 70 SRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRL---RAQRLNTINSS 146 (479)
Q Consensus 70 ~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~---Ra~Rl~~~~~~ 146 (479)
T Consensus 125 ePLqTGIkaID~mi--PIGRGQRELIiGDrqTGKTaIAldtIiNQk~~~V~cIYVAIGQK~s~Va~iv~~L~~~gAm~yT 202 (507)
T PRK07165 125 EQLYTGIVAIDLLI--PIGKGQRELIIGDRQTGKTHIALNTIINQKNRNVKCIYVAIGQKRENLSRIYETLKEHDALKNT 202 (507)
T ss_pred CHHHHHHHHHHCCC--CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHE
T ss_conf 61343467876135--5567616777357887788999999984546895899998310177999999999877975652
Q ss_pred HHEECCCC--HH---------HHHHHHHHCCCCCEEEECHHHHHH---------H---HHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 00003478--89---------999999731698289972168766---------5---4204455636799999999999
Q gi|254780334|r 147 VYIAIETN--VE---------DIIATLITNEKPDLVIIDSIQTLW---------S---QTAESSPGTVIQVRTSVQAMIQ 203 (479)
Q Consensus 147 i~~~~e~~--l~---------~il~~~i~~~~~~~vVIDSIQtl~---------~---~~~~s~~GsvsQvre~~~~L~~ 203 (479)
T Consensus 203 iVV~A~sd~p~~qylAPy~g~aiAEy-f~~~~dvLiiyDDLTkhA~AyReisLll~rPPGReayPgdvFy~h---srLLE 278 (507)
T PRK07165 203 IIIDAPSTSSYEQYLAPYVAMAHAEN-ISYNDDVLIVFDDLTKHANIYREIALLTNKPVGKEAFPGDIFFAH---SKLLE 278 (507)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHH-HHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH---HHHHH
T ss_conf 57631577827777788888878898-864685699964768999999988987279999778996057661---68888
Q ss_pred H-HH---HCCCEEEEEEEECCCCCCCC--HHHHHHHHHEEEEEECCCCC
Q ss_conf 7-53---07978999863036654331--14578775302785155566
Q gi|254780334|r 204 Y-AK---KNGVAMVLVGHVTKEGQIAG--PRVIEHMVDAVLYFEGGTRN 246 (479)
Q Consensus 204 ~-AK---~~~i~vilighvTK~G~iAG--p~~LeH~VD~vl~~ege~~~ 246 (479)
T Consensus 279 Ra~kl~g~gSiTaLPIi-eT~~gDisayIpTNviSITDGQI~l~~~Lf~ 326 (507)
T PRK07165 279 RAGKFKNRKSITALPIL-QTVDNDITSLISSNIISITDGQIVTSSELFA 326 (507)
T ss_pred HHHHCCCCCEEEEEEEE-EECCCCCCCCCCCCEEEECCCEEEECHHHHH
T ss_conf 87612699615760178-7027862243566447741762885176774