HHsearch alignment for GI: 254780334 and conserved domain: PRK07471
>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=97.25 E-value=0.019 Score=37.42 Aligned_cols=195 Identities=19% Similarity=0.230 Sum_probs=92.6
Q ss_pred CCCCCCCCCCCC-------HHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCE----------EEEECC
Q ss_conf 455666323781-------248888659857870899954987518899999999985039819----------999864
Q gi|254780334|r 65 SIEEESRIQTHI-------DELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRI----------TYVSGE 127 (479)
Q Consensus 65 ~~~~~~Ri~TGi-------~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~v----------lYvS~E 127 (479)
T Consensus 8 ~~~p~P~~~~~liGqe~~~~~L~~a~~~grl~-HA~Lf~Gp~GiGK~tlA~~~A~~ll~~~~~~~~~~~~~~~~l~~~~~ 86 (363)
T PRK07471 8 EADPHPRETTALFGHAAAEAALLDAYRSGRLH-HAWLIGGPQGIGKATLAYRMARFLLATPPPGGDAVFPPPASLAVDPD 86 (363)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC-CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 99959998273168199999999999859976-45876799981889999999999857999777776787053125877
Q ss_pred CC-HHHHHHHHHHCCCCCCCHHEE------------CCCCHHHHHHHHHH-------CCCCCEEEECHHHHHHHHHHCCC
Q ss_conf 63-047888875201577510000------------34788999999973-------16982899721687665420445
Q gi|254780334|r 128 EA-IGQIRLRAQRLNTINSSVYIA------------IETNVEDIIATLIT-------NEKPDLVIIDSIQTLWSQTAESS 187 (479)
Q Consensus 128 Es-~~Qi~~Ra~Rl~~~~~~i~~~------------~e~~l~~il~~~i~-------~~~~~~vVIDSIQtl~~~~~~s~ 187 (479)
T Consensus 87 ~p~~r~i~~-----~-~hpdl~~i~r~~d~k~~~~~~~I~Vd~iR~-l~~~~~~~p~~g~~kV~IId~ad~mn------- 152 (363)
T PRK07471 87 HPVARRIAA-----G-AHGGLLTLERSWNEKGKRLRTVITVDEVRE-TIGFFGLTAAEGGWRVVIVDTADEMN------- 152 (363)
T ss_pred CCHHHHHHC-----C-CCCCEEEEECCCCCCCCCCCCCCCHHHHHH-HHHHHCCCCCCCCCEEEEEECHHHHC-------
T ss_conf 728999952-----6-999846676200113332124453999999-99997248524896699986878738-------
Q ss_pred CCCHHHHHHHHHHHHHHHHH--CCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEEECCCCCC
Q ss_conf 56367999999999997530--7978999863036654331145787753027851555666544215676320256765
Q gi|254780334|r 188 PGTVIQVRTSVQAMIQYAKK--NGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFEGGTRNTQYDYRILRSVKNRFGPTD 265 (479)
Q Consensus 188 ~GsvsQvre~~~~L~~~AK~--~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~ege~~~~~~~~R~Lr~~KNRfG~t~ 265 (479)
T Consensus 153 -------~~aaNALLK~LEEPP~~t~fiLit~~--~~-----~llpTI~-------------------SRCq~~~~~~l~ 199 (363)
T PRK07471 153 -------ANAANALLKVLEEPPARSLLLLVSHA--PA-----RLLPTIR-------------------SRCRKLRLRPLA 199 (363)
T ss_pred -------HHHHHHHHHHHCCCCCCEEEEEEECC--HH-----HCHHHHH-------------------HHCCCCCCCCCC
T ss_conf -------89999999972158988389986399--77-----7779999-------------------735242589959
Q ss_pred CEE-EEEECCCCCEEECCHHHHHHCCCCCCCCCEEEEEEECCC
Q ss_conf 127-998515663110140455511476676734899730489
Q gi|254780334|r 266 EIG-VFEMSDKGLQEVSDPSKIFLSDRDSTSPGTAVFAGIEGT 307 (479)
Q Consensus 266 e~g-vf~m~~~Gl~~v~~ps~~fl~~~~~~~~Gs~v~~~~eG~ 307 (479)
T Consensus 200 ~~~~~~~L~~~~~~~~~~~~~~~la~~a~Gs~~~Al~l~~~~~ 242 (363)
T PRK07471 200 PEDVIAALAEAGGPALDDAELAALAALAEGSVGRALRLAGGDG 242 (363)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCH
T ss_conf 9999999998438999989999999975899999998747985