HHsearch alignment for GI: 254780334 and conserved domain: PRK08006

>PRK08006 replicative DNA helicase; Provisional.
Probab=99.91  E-value=1.6e-22  Score=183.87  Aligned_cols=199  Identities=18%  Similarity=0.278  Sum_probs=145.4

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCCEEEEECCCCHHHHHHHHH---------
Q ss_conf             66323781248888659857870899954987518899999999985-03981999986463047888875---------
Q gi|254780334|r   69 ESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLA-YKKHRITYVSGEEAIGQIRLRAQ---------  138 (479)
Q Consensus        69 ~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a-~~g~~vlYvS~EEs~~Qi~~Ra~---------  138 (479)
T Consensus       204 i~Gi~TGf~~LD~~t-~Gl~~G~LiviaaRPsmGKTalalnia~~~a~~~~~~V~~fSlEMs~~ql~~Rlla~~s~v~~~  282 (471)
T PRK08006        204 VTGVNTGYDDLNKKT-AGLQPSDLIIVAARPSMGKTTFAMNLCENAAMLQDKPVLIFSLEMPGEQIMMRMLASLSRVDQT  282 (471)
T ss_pred             CCCCCCCHHHHHHHH-CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCC
T ss_conf             743668838898641-6882173899994699876999999999999866995799816799999999999974477755


Q ss_pred             -------------HC----C--CCCCCHHEECC--CCHHHHHH---HHHH-CCCCCEEEECHHHHHHHHHHCCCCCCHHH
Q ss_conf             -------------20----1--57751000034--78899999---9973-16982899721687665420445563679
Q gi|254780334|r  139 -------------RL----N--TINSSVYIAIE--TNVEDIIA---TLIT-NEKPDLVIIDSIQTLWSQTAESSPGTVIQ  193 (479)
Q Consensus       139 -------------Rl----~--~~~~~i~~~~e--~~l~~il~---~~i~-~~~~~~vVIDSIQtl~~~~~~s~~GsvsQ  193 (479)
T Consensus       283 ~i~~g~l~~~e~~~l~~~~~~~~~~~~l~idd~~~~t~~~i~a~~r~~~~~~~gl~lvvIDYLqL~~~~~~~--~~r~~e  360 (471)
T PRK08006        283 RIRTGQLDDEDWARISGTMGILLEKRNMYIDDSSGLTPTEVRSRARRIFREHGGLSLIMIDYLQLMRVPSLS--DNRTLE  360 (471)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCC--CCHHHH
T ss_conf             453688799999999999999975188577368999899999999999986489868996388661678744--106689


Q ss_pred             HHHHHHHHHHHHHHCCCEEEEEEEECCCC-----------CCCCHHHHHHHHHEEEEEECCC-C---CCCCCCEEEEEEE
Q ss_conf             99999999997530797899986303665-----------4331145787753027851555-6---6654421567632
Q gi|254780334|r  194 VRTSVQAMIQYAKKNGVAMVLVGHVTKEG-----------QIAGPRVIEHMVDAVLYFEGGT-R---NTQYDYRILRSVK  258 (479)
Q Consensus       194 vre~~~~L~~~AK~~~i~vilighvTK~G-----------~iAGp~~LeH~VD~vl~~ege~-~---~~~~~~R~Lr~~K  258 (479)
T Consensus       361 i~~isr~lK~lAkel~ipVi~LsQLnR~~e~R~dkrP~lsDLReSG~IEqdAD~V~~l~R~~~y~~~~~~~~~~elivaK  440 (471)
T PRK08006        361 IAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGK  440 (471)
T ss_pred             HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEC
T ss_conf             99999999999999699689970168310016999987340224340154286899975503357888878816999973


Q ss_pred             ECCCCCCCEEEE
Q ss_conf             025676512799
Q gi|254780334|r  259 NRFGPTDEIGVF  270 (479)
Q Consensus       259 NRfG~t~e~gvf  270 (479)
T Consensus       441 nR~G~~G~v~l~  452 (471)
T PRK08006        441 QRNGPIGTVRLT  452 (471)
T ss_pred             CCCCCCEEEEEE
T ss_conf             688986069999