HHsearch alignment for GI: 254780334 and conserved domain: PRK08082
>PRK08082 consensus.
Probab=99.91 E-value=1.1e-22 Score=185.01 Aligned_cols=200 Identities=23% Similarity=0.341 Sum_probs=147.0
Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCCEEEEECCCCHHHHHHHHH--------
Q ss_conf 666323781248888659857870899954987518899999999985-03981999986463047888875--------
Q gi|254780334|r 68 EESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLA-YKKHRITYVSGEEAIGQIRLRAQ-------- 138 (479)
Q Consensus 68 ~~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a-~~g~~vlYvS~EEs~~Qi~~Ra~-------- 138 (479)
T Consensus 182 ~~~Gi~TGf~~LD~lt-~G~~~g~LiviaaRPsmGKTa~alnia~~~a~~~~~~V~~fSlEM~~~~l~~R~la~~s~i~~ 260 (453)
T PRK08082 182 DITGIPTGFTELDRMT-AGFQRNDLIIVAARPSVGKTAFALNIAQNVATKTDENVAIFSLEMGADQLVMRMLCAEGNIDA 260 (453)
T ss_pred CCCCCCCCHHHHHHHH-CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCH
T ss_conf 9775548848888641-477758579998678875789999999999985599489973138989999999971558886
Q ss_pred -HC--C----------------CCCCCHHEECC--CCHHHHH---HHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHH
Q ss_conf -20--1----------------57751000034--7889999---99973169828997216876654204455636799
Q gi|254780334|r 139 -RL--N----------------TINSSVYIAIE--TNVEDII---ATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQV 194 (479)
Q Consensus 139 -Rl--~----------------~~~~~i~~~~e--~~l~~il---~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQv 194 (479)
T Consensus 261 ~~i~~g~l~~~e~~~i~~a~~~l~~~~l~idd~~~~~i~~i~~~~r~~~~~~~~~livIDYlqLi~~~~~-~~~~r~~ev 339 (453)
T PRK08082 261 QRLRTGSLTSDDWGKLTMAMGSLSNAGIYIDDTPGIRVNEIRAKCRRLKQEQGLGMILIDYLQLIQGSGR-SGENRQQEV 339 (453)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCC-CCCCHHHHH
T ss_conf 6775189999999999999998506973897899998999999999999866998899950773377898-887899999
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEEECCCC-----------CCCCHHHHHHHHHEEEEEECC-CCC---CCCCCEEEEEEEE
Q ss_conf 9999999997530797899986303665-----------433114578775302785155-566---6544215676320
Q gi|254780334|r 195 RTSVQAMIQYAKKNGVAMVLVGHVTKEG-----------QIAGPRVIEHMVDAVLYFEGG-TRN---TQYDYRILRSVKN 259 (479)
Q Consensus 195 re~~~~L~~~AK~~~i~vilighvTK~G-----------~iAGp~~LeH~VD~vl~~ege-~~~---~~~~~R~Lr~~KN 259 (479)
T Consensus 340 ~~isr~LK~lAkel~ipvi~lsQLnR~~e~R~~krP~lsDLreSG~IEqdAD~v~~l~R~~~y~~~~~~~~~~e~ivaK~ 419 (453)
T PRK08082 340 SEISRTLKALARELEVPVIALSQLSRGVESRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYDRETENKNIIEIIIAKQ 419 (453)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCEEEEECCHHHCCCCCCCCCEEEEEEECC
T ss_conf 99999999999996997999644784312379999771010265520533668989655654388888788069999736
Q ss_pred CCCCCCCEEE
Q ss_conf 2567651279
Q gi|254780334|r 260 RFGPTDEIGV 269 (479)
Q Consensus 260 RfG~t~e~gv 269 (479)
T Consensus 420 RnG~~g~v~l 429 (453)
T PRK08082 420 RNGPVGTVEL 429 (453)
T ss_pred CCCCCCEEEE
T ss_conf 8998615999