HHsearch alignment for GI: 254780334 and conserved domain: PRK08149
>PRK08149 ATP synthase SpaL; Validated.
Probab=97.40 E-value=0.0052 Score=41.50 Aligned_cols=107 Identities=14% Similarity=0.155 Sum_probs=62.2
Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH---CCCCCC
Q ss_conf 66323781248888659857870899954987518899999999985039819999864630478888752---015775
Q gi|254780334|r 69 ESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQR---LNTINS 145 (479)
Q Consensus 69 ~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~R---l~~~~~ 145 (479)
T Consensus 131 ~e~l~TGIraID~l~--pigkGQR~gIf~gsGvGKs~Ll~~i~~~~-~adv~Via~IGeRgr-Ev~efi~~~~~~~~l~r 206 (427)
T PRK08149 131 REPLITGVRAIDGLL--TCGVGQRMGIFASAGCGKTMLMNMLIEHT-EADVFVIGLIGERGR-EVTEFVEMLRASHKKEK 206 (427)
T ss_pred CCCEECCCEEECCCC--CCCCCCEEECCCCCCCCHHHHHHHHHHHC-CCCEEEEEEECCCHH-HHHHHHHHHHCCCCCCE
T ss_conf 850003864310445--32467540002789986779999888635-899899997023378-99999997503685203
Q ss_pred CHHEECCCC---HH---------HHHHHHHHCCCCCEEEECHHHHH
Q ss_conf 100003478---89---------99999973169828997216876
Q gi|254780334|r 146 SVYIAIETN---VE---------DIIATLITNEKPDLVIIDSIQTL 179 (479)
Q Consensus 146 ~i~~~~e~~---l~---------~il~~~i~~~~~~~vVIDSIQtl 179 (479)
T Consensus 207 svvv~atsd~p~~~R~~a~~~a~tiAEyfrd~G~~VLl~~Dsltr~ 252 (427)
T PRK08149 207 CVLVYATSDFSSVDRCNAALVATTVAEYFRDQGKRVVLFIDSMTRY 252 (427)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
T ss_conf 6899715889989999999887789999986798379961757888