HHsearch alignment for GI: 254780334 and conserved domain: PRK08727

Probab=97.65  E-value=0.0006  Score=48.34  Aligned_cols=96  Identities=18%  Similarity=0.350  Sum_probs=67.1

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHCCCC
Q ss_conf             87089995498751889999999998503981999986463047888875201577510000347889999999731698
Q gi|254780334|r   89 RGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNEKP  168 (479)
Q Consensus        89 ~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~~~~  168 (479)
T Consensus        40 ~~~~lyl~G~~GsGKTHLl~a~~~~~~~~~~~~~yl~l~~~~~~~----------------------~~~l~~-l--e~~   94 (233)
T PRK08727         40 SSDWLYLSGPAGTGKTHLALSLCAAAEQAGRSSAYLPLQAAAGRL----------------------RDALEA-L--EGR   94 (233)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH----------------------HHHHHH-H--CCC
T ss_conf             889899989999988999999999998279972884478853202----------------------567753-1--038


Q ss_pred             CEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE
Q ss_conf             28997216876654204455636799999999999753079789998630
Q gi|254780334|r  169 DLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHV  218 (479)
Q Consensus       169 ~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighv  218 (479)
T Consensus        95 ~ll~iDDid~i~g~~---------~~e~aLFhL~N~~~~~~~~ll~ts~~  135 (233)
T PRK08727         95 SLVALDGVDSIAGQR---------EDEVALFDFHNRARAAGITLLYTARQ  135 (233)
T ss_pred             CEEEEECCHHCCCCH---------HHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf             978985501126982---------79999999999998619838997798