HHsearch alignment for GI: 254780334 and conserved domain: PRK09165

>PRK09165 replicative DNA helicase; Provisional.
Probab=99.91  E-value=7.1e-23  Score=186.45  Aligned_cols=202  Identities=20%  Similarity=0.300  Sum_probs=145.4

Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC---------------CCCCEEEEECCCCHHH
Q ss_conf             6663237812488886598578708999549875188999999999850---------------3981999986463047
Q gi|254780334|r   68 EESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAY---------------KKHRITYVSGEEAIGQ  132 (479)
Q Consensus        68 ~~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~---------------~g~~vlYvS~EEs~~Q  132 (479)
T Consensus       184 ~~~Gi~TGf~~LD~~t-~G~~~GdLiIIAARPsmGKTafaLniA~n~A~~~~~~~~~~~~~~~~~g~~V~~FSLEMs~~q  262 (484)
T PRK09165        184 HLSGISTGLRDLDSKL-GGLHPSDLIILAGRPSMGKTALATNIAFNAAKAYLREAQPDGSKKAVNGGVVGFFSLEMSAEQ  262 (484)
T ss_pred             CCCCEECCCHHHHHHH-CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHH
T ss_conf             9773315844599871-588877379996079997789999999999987410222233211368984899947799999


Q ss_pred             HHHHHH--HCCCC-------------------------CCCHHEECC--CCHHHHH---HHHHHCCCCCEEEECHHHHHH
Q ss_conf             888875--20157-------------------------751000034--7889999---999731698289972168766
Q gi|254780334|r  133 IRLRAQ--RLNTI-------------------------NSSVYIAIE--TNVEDII---ATLITNEKPDLVIIDSIQTLW  180 (479)
Q Consensus       133 i~~Ra~--Rl~~~-------------------------~~~i~~~~e--~~l~~il---~~~i~~~~~~~vVIDSIQtl~  180 (479)
T Consensus       263 l~~Rlls~~s~V~~~~ir~g~l~~~e~~~i~~a~~~l~~~~l~IdD~~~~ti~~Ira~~Rr~k~~~gl~livIDYLqLi~  342 (484)
T PRK09165        263 LATRILSEQSEISSSKIRRGKISEEDFEKLVDASQELQKLPLYIDDTPALSISALRARARRLKRQHGLDLLVIDYLQLIR  342 (484)
T ss_pred             HHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHCC
T ss_conf             99999999726861355448999999999999999997198489779998799999999999986099889995176357


Q ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC-----------CCCHHHHHHHHHEEEEEECCC-C---
Q ss_conf             5420445563679999999999975307978999863036654-----------331145787753027851555-6---
Q gi|254780334|r  181 SQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQ-----------IAGPRVIEHMVDAVLYFEGGT-R---  245 (479)
Q Consensus       181 ~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK~G~-----------iAGp~~LeH~VD~vl~~ege~-~---  245 (479)
T Consensus       343 ~~~~~~~~~R~~ev~~Isr~LK~lAkel~ipVi~LsQLnR~~E~R~dkrP~lsDLReSGsIEQDADvV~flyR~~yY~~~  422 (484)
T PRK09165        343 GSSKRSQDNRVQEISEITQGLKALAKELNIPVIALSQLSRQVEQRDDKRPQLSDLRESGSIEQDADVVMFVYREEYYLKR  422 (484)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCHHHHCCC
T ss_conf             88888612199999999999999999969969997457844234799997600103555202207789996447661344


Q ss_pred             -C-C-C--------------CCCEEEEEEEECCCCCCCEEEE
Q ss_conf             -6-6-5--------------4421567632025676512799
Q gi|254780334|r  246 -N-T-Q--------------YDYRILRSVKNRFGPTDEIGVF  270 (479)
Q Consensus       246 -~-~-~--------------~~~R~Lr~~KNRfG~t~e~gvf  270 (479)
T Consensus       423 ~~~~~~~~~~~~~~~~~~~~~~~~elivaKnRnG~~G~v~l~  464 (484)
T PRK09165        423 KEPREGTPKHEEWQEKMEKVHNKAEVIIAKQRHGPTGTVKLH  464 (484)
T ss_pred             CCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEE
T ss_conf             587767520122321012458807999963788986069999