HHsearch alignment for GI: 254780334 and conserved domain: PRK09183
>PRK09183 transposase/IS protein; Provisional.
Probab=98.19 E-value=1.9e-05 Score=59.27 Aligned_cols=158 Identities=20% Similarity=0.256 Sum_probs=90.4
Q ss_pred EECCCCCCCCCCCCCCCCHHHHHHHCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 0313334556663237812488886598-578708999549875188999999999850398199998646304788887
Q gi|254780334|r 59 FMLSEESIEEESRIQTHIDELDRVTGGG-FVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRA 137 (479)
Q Consensus 59 ~~l~~~~~~~~~Ri~TGi~eLDrvLGGG-l~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra 137 (479)
T Consensus 71 ktle~fDf~~~~~l~~--~~i~~La~~~fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~-a 147 (258)
T PRK09183 71 KTFEEYDFTFATGAPQ--KQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAADLLLQLST-A 147 (258)
T ss_pred CCHHHCCCCCCCCCCH--HHHHHHHCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH-H
T ss_conf 7775556546886238--999988258166558867998999986899999999999987993999789999999999-9
Q ss_pred HHCCCCCCCHHEECCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 52015775100003478899999997316982899721687665420445563679999999999975307978999863
Q gi|254780334|r 138 QRLNTINSSVYIAIETNVEDIIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGH 217 (479)
Q Consensus 138 ~Rl~~~~~~i~~~~e~~l~~il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~viligh 217 (479)
T Consensus 148 ~~------------~~~~~~~l~r~--l~~~dLLIiDdlG~--------~~~~~~-~~~~lfeli~~Rye~~-S~IiTSn 203 (258)
T PRK09183 148 QR------------QGRYKTTLQRG--VMAPRLLIIDEIGY--------LPFSQE-EANLFFQVIAKRYEKG-AMILTSN 203 (258)
T ss_pred HH------------CCCHHHHHHHH--HCCCCEEEEHHHHC--------CCCCHH-HHHHHHHHHHHHHCCC-CEEEECC
T ss_conf 87------------68599999987--43465144313315--------468888-9999999999985767-7899889
Q ss_pred ECCC---CCCCC-HHHHHHHHHE------EEEEECC
Q ss_conf 0366---54331-1457877530------2785155
Q gi|254780334|r 218 VTKE---GQIAG-PRVIEHMVDA------VLYFEGG 243 (479)
Q Consensus 218 vTK~---G~iAG-p~~LeH~VD~------vl~~ege 243 (479)
T Consensus 204 ~~~~~W~~~f~~D~~la~AilDRL~H~a~~i~l~Ge 239 (258)
T PRK09183 204 LPFGQWDQTFAGDAALTSAMLDRLLHHSHVVQIKGE 239 (258)
T ss_pred CCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 997898565168699999999986046179974587