HHsearch alignment for GI: 254780334 and conserved domain: PRK09281
>PRK09281 F0F1 ATP synthase subunit alpha; Validated.
Probab=98.02 E-value=0.00019 Score=52.05 Aligned_cols=109 Identities=19% Similarity=0.265 Sum_probs=70.6
Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHC---CCCCC
Q ss_conf 663237812488886598578708999549875188999999999850398199998646304788887520---15775
Q gi|254780334|r 69 ESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRL---NTINS 145 (479)
Q Consensus 69 ~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl---~~~~~ 145 (479)
T Consensus 143 ~epL~TGIkaID~l~--PiGrGQR~lIiGd~gtGKT~iaidtIinqk~~~vicVyvaIGer~seV~~~v~~L~~~gal~~ 220 (502)
T PRK09281 143 HEPLQTGIKAIDAMI--PIGRGQRELIIGDRQTGKTAIAIDTIINQKGKDVICIYVAIGQKASTVANVVRKLEEHGAMEY 220 (502)
T ss_pred CCCCCCCHHHHHHCC--CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCC
T ss_conf 752331135554125--656875667524787338899999998532588369999851221789999998754486411
Q ss_pred CHHEECCCC---H---------HHHHHHHHHCCCCCEEEECHHHHH
Q ss_conf 100003478---8---------999999973169828997216876
Q gi|254780334|r 146 SVYIAIETN---V---------EDIIATLITNEKPDLVIIDSIQTL 179 (479)
Q Consensus 146 ~i~~~~e~~---l---------~~il~~~i~~~~~~~vVIDSIQtl 179 (479)
T Consensus 221 TvvV~ata~dpa~lr~~Apyaa~aIAEyFrd~G~dVLlv~DdLtr~ 266 (502)
T PRK09281 221 TIVVAATASDPAPLQYLAPYAGCAMGEYFMDNGKDALIVYDDLSKQ 266 (502)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHH
T ss_conf 3799717999999999999999999999996799489998556899