HHsearch alignment for GI: 254780334 and conserved domain: PRK10070
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional.
Probab=97.40 E-value=0.0021 Score=44.34 Aligned_cols=137 Identities=15% Similarity=0.297 Sum_probs=70.6
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC----CHHHH-HHHHHHCCCCCCCHHEECCCC-HHHH-
Q ss_conf 8578708999549875188999999999850398199998646----30478-888752015775100003478-8999-
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE----AIGQI-RLRAQRLNTINSSVYIAIETN-VEDI- 158 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE----s~~Qi-~~Ra~Rl~~~~~~i~~~~e~~-l~~i- 158 (479)
T Consensus 50 ~I~~GEi~~ivG~SGsGKSTLlr~i~g-L~~Pt~G~I~i~G~di~~~~~~~l~~~rrr~igmVFQ~~aL~P~~TV~eNi~ 128 (400)
T PRK10070 50 AIEEGEIFVIMGLSGSGKSTMVRLLNR-LIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTA 128 (400)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHC-CCCCCCCEEEECCEECCCCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHH
T ss_conf 887999999999998469999999975-9998981899999999989978987651465599957974143888888787
Q ss_pred ----------------------------------------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHH
Q ss_conf ----------------------------------------------9999731698289972168766542044556367
Q gi|254780334|r 159 ----------------------------------------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVI 192 (479)
Q Consensus 159 ----------------------------------------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~Gsvs 192 (479)
T Consensus 129 ~~l~~~~~~~~e~~~ra~e~L~~VgL~~~~~~yP~eLSGGqqQRVaiARAL-a~~P~iLL~DEP~SA----LDp----~~ 199 (400)
T PRK10070 129 FGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARAL-AINPDILLMDEAFSA----LDP----LI 199 (400)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHCCHHHHHHHHHHHHH-HCCCCEEEEECCCCC----CCH----HH
T ss_conf 899984999899999999999974990242189344899999999999998-629999997087654----598----99
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 9999999999975307978999863036654331145787753027851
Q gi|254780334|r 193 QVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 193 Qvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 200 -r~~i~~~l~~L~~~~~~TiifVTHDl~--------eA~~laDRIaVM~ 239 (400)
T PRK10070 200 -RTEMQDELVKLQAKHQRTIVFISHDLD--------EAMRIGDRIAIMQ 239 (400)
T ss_pred -HHHHHHHHHHHHHHHCCEEEEECCCHH--------HHHHHCCEEEEEE
T ss_conf -999999999999985999999899999--------9998699999998