HHsearch alignment for GI: 254780334 and conserved domain: PRK10535
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional.
Probab=97.63 E-value=0.0033 Score=42.94 Aligned_cols=136 Identities=18% Similarity=0.300 Sum_probs=72.3
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC----CHHHH-HHHHHHCCCCCCCHHEECCCC-HHHH
Q ss_conf 98578708999549875188999999999850398199998646----30478-888752015775100003478-8999
Q gi|254780334|r 85 GGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE----AIGQI-RLRAQRLNTINSSVYIAIETN-VEDI 158 (479)
Q Consensus 85 GGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE----s~~Qi-~~Ra~Rl~~~~~~i~~~~e~~-l~~i 158 (479)
T Consensus 29 l~i~~Ge~v~i~G~nGsGKSTll~-~l~gl~~p~~G~v~~~G~~~~~~~~~~~~~~rr~~ig~v~Q~~~l~~~~tv~env 107 (648)
T PRK10535 29 LTIYAGEMVAIVGASGSGKSTLMN-ILGCLDKPTSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAAQNV 107 (648)
T ss_pred EEECCCCEEEEECCCCCHHHHHHH-HHHCCCCCCCEEEEECCEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHH
T ss_conf 999899899999999962999999-9956999996699999999885998999998658689986797437999599999
Q ss_pred -----------------------------------------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCH
Q ss_conf -----------------------------------------------999973169828997216876654204455636
Q gi|254780334|r 159 -----------------------------------------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTV 191 (479)
Q Consensus 159 -----------------------------------------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~Gsv 191 (479)
T Consensus 108 ~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~p~~LSgGq~QRvaiAral-~~~p~vlllDEPT----~~LD~----- 177 (648)
T PRK10535 108 EVPAVYAGLERKQRLERAQELLQRLGLEDRVEYQPSQLSGGQQQRVSIARAL-MNGGQVILADEPT----GALDS----- 177 (648)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHCCHHHHHHHHHHHHH-HHCCCEEEECCCC----CCCCH-----
T ss_conf 9899877999899999999999977996675578233899999999999999-7289899956885----55799-----
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 79999999999975307978999863036654331145787753027851
Q gi|254780334|r 192 IQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 192 sQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 178 ~~~~~v~~ll~~l-~~~G~tii~vtH--------d~~~a~~-a~Rii~~~ 217 (648)
T PRK10535 178 HSGEEVMAILHQL-RDRGHTVIIVTH--------DPQVAAQ-AERVIEIR 217 (648)
T ss_pred HHHHHHHHHHHHH-HHCCCEEEEECC--------CHHHHHH-CCEEEEEE
T ss_conf 9999999999999-977999999764--------8699964-99799995