HHsearch alignment for GI: 254780334 and conserved domain: PRK10771
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional.
Probab=97.58 E-value=0.0023 Score=44.05 Aligned_cols=135 Identities=16% Similarity=0.225 Sum_probs=74.5
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHH-HHHHHHHCCCCCCCHHEEC-------------
Q ss_conf 85787089995498751889999999998503981999986463047-8888752015775100003-------------
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQ-IRLRAQRLNTINSSVYIAI------------- 151 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Q-i~~Ra~Rl~~~~~~i~~~~------------- 151 (479)
T Consensus 21 ~i~~GE~v~iiG~nGaGKSTLl~~i~Gll~p~sG~I~-i~G~~~~~~~~~~r--~i~~v~Q~~~l~~~ltv~eni~~~~~ 97 (233)
T PRK10771 21 TVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLL-INGVDHTTTPPSRR--PVSMLFQENNLFSHLTVAQNIGLGLN 97 (233)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEE-ECCEECCCCCHHHC--CEEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 9889989999999998199999999659999855999-99999887998888--87999057766889909999987862
Q ss_pred ------------------CCCHHHH-----------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf ------------------4788999-----------------99997316982899721687665420445563679999
Q gi|254780334|r 152 ------------------ETNVEDI-----------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRT 196 (479)
Q Consensus 152 ------------------e~~l~~i-----------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre 196 (479)
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGGq~QRv~iAraL-~~~P~vLllDEPt----s~LD-----~~~~~~ 167 (233)
T PRK10771 98 PGLKLNAAQREKLHAIARQMGIENLLARLPGELSGGQRQRVALARCL-VREQPILLLDEPF----SALD-----PALRQE 167 (233)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCHHHHCCCHHHCCHHHHHHHHHHHHH-HCCCCEEEEECCC----CCCC-----HHHHHH
T ss_conf 26787688999999999877996686089455999999999999998-5599999992877----5579-----999999
Q ss_pred HHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 999999975307978999863036654331145787753027851
Q gi|254780334|r 197 SVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 197 ~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 168 i~~ll~~l~~~~~~til~vtHd--------l~~~~~~adri~vl~ 204 (233)
T PRK10771 168 MLTLVSQVCQQRQLTLLMVSHS--------VEDAARIAPRSLVVA 204 (233)
T ss_pred HHHHHHHHHHHCCCEEEEEECC--------HHHHHHHCCEEEEEE
T ss_conf 9999999998369899999248--------999999699999998