HHsearch alignment for GI: 254780334 and conserved domain: PRK10867

>PRK10867 signal recognition particle protein; Provisional.
Probab=97.28  E-value=0.019  Score=37.33  Aligned_cols=99  Identities=22%  Similarity=0.232  Sum_probs=68.9

Q ss_pred             CHHHHHHHCCCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCCEEEEECCC----CHHHHHHHHHHCCCC
Q ss_conf             1248888659857-------870899954987518899999999985-0398199998646----304788887520157
Q gi|254780334|r   76 IDELDRVTGGGFV-------RGSVILVGGDPGIGKSTLLMQTAASLA-YKKHRITYVSGEE----AIGQIRLRAQRLNTI  143 (479)
Q Consensus        76 i~eLDrvLGGGl~-------~Gs~~Li~G~PGvGKSTL~Lqia~~~a-~~g~~vlYvS~EE----s~~Qi~~Ra~Rl~~~  143 (479)
T Consensus        79 ~~eL~~lLg~~~~~l~~~~~~p~VIm~vGLqGsGKTTT~aKLA~~lk~k~~k~vllvaaDt~RpaA~eQL~~la~~~~v~  158 (453)
T PRK10867         79 RNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVD  158 (453)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             99999985888766633789996999974688851858999999999738983798558877058999999999851980


Q ss_pred             CCCHHEECCCCHHHHHHHH---HHCCCCCEEEECHH
Q ss_conf             7510000347889999999---73169828997216
Q gi|254780334|r  144 NSSVYIAIETNVEDIIATL---ITNEKPDLVIIDSI  176 (479)
Q Consensus       144 ~~~i~~~~e~~l~~il~~~---i~~~~~~~vVIDSI  176 (479)
T Consensus       159 ~~--~~~~~~dp~~ia~~a~~~ak~~~~DvvivDTA  192 (453)
T PRK10867        159 FF--PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTA  192 (453)
T ss_pred             EE--CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             43--67889988999999999999779999999787