HHsearch alignment for GI: 254780334 and conserved domain: PRK10867
>PRK10867 signal recognition particle protein; Provisional.
Probab=97.28 E-value=0.019 Score=37.33 Aligned_cols=99 Identities=22% Similarity=0.232 Sum_probs=68.9
Q ss_pred CHHHHHHHCCCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCCEEEEECCC----CHHHHHHHHHHCCCC
Q ss_conf 1248888659857-------870899954987518899999999985-0398199998646----304788887520157
Q gi|254780334|r 76 IDELDRVTGGGFV-------RGSVILVGGDPGIGKSTLLMQTAASLA-YKKHRITYVSGEE----AIGQIRLRAQRLNTI 143 (479)
Q Consensus 76 i~eLDrvLGGGl~-------~Gs~~Li~G~PGvGKSTL~Lqia~~~a-~~g~~vlYvS~EE----s~~Qi~~Ra~Rl~~~ 143 (479)
T Consensus 79 ~~eL~~lLg~~~~~l~~~~~~p~VIm~vGLqGsGKTTT~aKLA~~lk~k~~k~vllvaaDt~RpaA~eQL~~la~~~~v~ 158 (453)
T PRK10867 79 RNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVD 158 (453)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 99999985888766633789996999974688851858999999999738983798558877058999999999851980
Q ss_pred CCCHHEECCCCHHHHHHHH---HHCCCCCEEEECHH
Q ss_conf 7510000347889999999---73169828997216
Q gi|254780334|r 144 NSSVYIAIETNVEDIIATL---ITNEKPDLVIIDSI 176 (479)
Q Consensus 144 ~~~i~~~~e~~l~~il~~~---i~~~~~~~vVIDSI 176 (479)
T Consensus 159 ~~--~~~~~~dp~~ia~~a~~~ak~~~~DvvivDTA 192 (453)
T PRK10867 159 FF--PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTA 192 (453)
T ss_pred EE--CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 43--67889988999999999999779999999787