HHsearch alignment for GI: 254780334 and conserved domain: PRK11300
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional.
Probab=97.32 E-value=0.009 Score=39.76 Aligned_cols=133 Identities=14% Similarity=0.223 Sum_probs=73.8
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC----CHHHHHHHHHHCCCC--------------CCCH
Q ss_conf 8578708999549875188999999999850398199998646----304788887520157--------------7510
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE----AIGQIRLRAQRLNTI--------------NSSV 147 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE----s~~Qi~~Ra~Rl~~~--------------~~~i 147 (479)
T Consensus 27 ~v~~Gei~~liGpnGaGKSTL~~~i~Gl~~p~~G~-I~~~G~~i~~~~~~~~~----r~g~~~~~q~~~l~~~ltv~enl 101 (255)
T PRK11300 27 EVREQEVVSLIGPNGAGKTTVFNCLTGFYKPTGGT-ILLDGQHIEGLPGHQIA----RMGVVRTFQHVRLFKEMTVIENL 101 (255)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEE-EEECCEECCCCCHHHHH----HCCCEEECCCCCCCCCCCHHHHH
T ss_conf 98999799999899964999999996798898608-99999988879999998----66825532230027786487776
Q ss_pred HEE----------------------------------CCCCHHH-----------------HHHHHHHCCCCCEEEECHH
Q ss_conf 000----------------------------------3478899-----------------9999973169828997216
Q gi|254780334|r 148 YIA----------------------------------IETNVED-----------------IIATLITNEKPDLVIIDSI 176 (479)
Q Consensus 148 ~~~----------------------------------~e~~l~~-----------------il~~~i~~~~~~~vVIDSI 176 (479)
T Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~Qrv~iAra-L~~~P~lLlLDEP 180 (255)
T PRK11300 102 LVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQAGNLAYGQQRRLEIARC-MVTQPRILMLDEP 180 (255)
T ss_pred HHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCHHHHHHHHHHH-HHHCCCEEEECCC
T ss_conf 555442022003433212520106689999999999997699213158846679488999999999-9729996998187
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 87665420445563679999999999975307978999863036654331145787753027851
Q gi|254780334|r 177 QTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 177 Qtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 181 t----~gLD-----~~~~~~i~~~i~~l~~~~g~tvl~itHd--------l~~v~~~aDrv~vl~ 228 (255)
T PRK11300 181 A----AGLN-----PKETKELDELIAELRNEHNVTVLLIEHD--------MKLVMGISDRIYVVN 228 (255)
T ss_pred C----CCCC-----HHHHHHHHHHHHHHHHCCCCEEEEECCC--------HHHHHHHCCEEEEEE
T ss_conf 5----4699-----9999999999999997159799999273--------899998699999999