HHsearch alignment for GI: 254780334 and conserved domain: PRK11308

>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional.
Probab=97.73  E-value=0.00039  Score=49.75  Aligned_cols=137  Identities=22%  Similarity=0.329  Sum_probs=74.0

Q ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC----CHHHHHHHHHHCCCCCCCHH-------------
Q ss_conf             8578708999549875188999999999850398199998646----30478888752015775100-------------
Q gi|254780334|r   86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE----AIGQIRLRAQRLNTINSSVY-------------  148 (479)
Q Consensus        86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE----s~~Qi~~Ra~Rl~~~~~~i~-------------  148 (479)
T Consensus        37 ~i~~GE~lgiVGeSGsGKSTL~~~l~gl~~p~~G~I~~-~G~dl~~~~~~~~~~~r~~i~~VfQ~p~~sLnP~~~v~~~l  115 (327)
T PRK11308         37 NLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYY-QGQDLLKADPEAQKLLRRKVQIVFQNPYGSLNPRKKVGQIL  115 (327)
T ss_pred             EECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEE-CCEECCCCCHHHHHHHHCCEEEEEECCHHHCCHHHHHHHHH
T ss_conf             98899999999998319999999995699988637998-99955779999999975577999868634338034243433


Q ss_pred             -----EECCCCHH-------H---------------------------HHHHHHHCCCCCEEEECHHHHHHHHHHCCCCC
Q ss_conf             -----00347889-------9---------------------------99999731698289972168766542044556
Q gi|254780334|r  149 -----IAIETNVE-------D---------------------------IIATLITNEKPDLVIIDSIQTLWSQTAESSPG  189 (479)
Q Consensus       149 -----~~~e~~l~-------~---------------------------il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~G  189 (479)
T Consensus       116 ~e~l~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~ryP~eLSGGq~QRv~IArA-L~~~P~lLi~DEPTsaLD~-------  187 (327)
T PRK11308        116 EEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRIAIARA-LMLDPDVVVADEPVSALDV-------  187 (327)
T ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHH-HHCCCCEEEEECCCCCCCH-------
T ss_conf             57788614899999999999999870456656645764479999999999999-8428989998478654699-------


Q ss_pred             CHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf             3679999999999975307978999863036654331145787753027851
Q gi|254780334|r  190 TVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE  241 (479)
Q Consensus       190 svsQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e  241 (479)
T Consensus       188 --~~q~~Il~ll~~l~~~~~~t~l~ITH--------Dl~~v~~iaDri~VMy  229 (327)
T PRK11308        188 --SVQAQVLNLMMDLQQELGLSYVFISH--------DLSVVEHIADDVMVMY  229 (327)
T ss_pred             --HHHHHHHHHHHHHHHHCCCEEEEECC--------CHHHHHHHCCEEEEEE
T ss_conf             --99999999999999700976999869--------8999998699899998