HHsearch alignment for GI: 254780334 and conserved domain: PRK11607
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional.
Probab=97.37 E-value=0.0013 Score=45.79 Aligned_cols=127 Identities=20% Similarity=0.292 Sum_probs=66.6
Q ss_pred HHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC-----------
Q ss_conf 488886598578708999549875188999999999850398199998646304788887520157751-----------
Q gi|254780334|r 78 ELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSS----------- 146 (479)
Q Consensus 78 eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~----------- 146 (479)
T Consensus 34 al~~v-sl~I~~GE~~~llGpsGsGKSTllr~i~Gl~-~p~~G~I~i~G~di~-~~~~~~r~ig~vfQ~~~L~p~ltV~e 110 (377)
T PRK11607 34 AVDDV-SLTIYKGEIFALLGASGCGKSTLLRMLAGFE-QPSAGQIMLDGVDLS-HVPPYQRPINMMFQSYALFPHMTVEQ 110 (377)
T ss_pred EECCC-EEEECCCCEEEEECCCCCHHHHHHHHHHCCC-CCCCEEEEECCEECC-CCCHHHCCEEEEECCCCCCCCCCHHH
T ss_conf 99051-8799999899999999848999999997699-998659999999988-79866665046701265587757545
Q ss_pred -HHE-------------------ECCCCHHHH-----------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCC
Q ss_conf -000-------------------034788999-----------------9999731698289972168766542044556
Q gi|254780334|r 147 -VYI-------------------AIETNVEDI-----------------IATLITNEKPDLVIIDSIQTLWSQTAESSPG 189 (479)
Q Consensus 147 -i~~-------------------~~e~~l~~i-----------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~G 189 (479)
T Consensus 111 Ni~~~l~~~~~~~~e~~~rv~e~l~~v~L~~~~~~~p~~LSGGqrQRVaiArAL-~~~P~lLllDEPt----s~LD---- 181 (377)
T PRK11607 111 NIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSL-AKRPKLLLLDEPM----GALD---- 181 (377)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHCCHHHHHHHHHHHHH-HCCCCEEEECCCC----CCCC----
T ss_conf 245478665999899999999998544627666589657898687899999987-4499789964875----4479----
Q ss_pred CHHHHHH-HHHHHHHHHHHCCCEEEEEEEE
Q ss_conf 3679999-9999999753079789998630
Q gi|254780334|r 190 TVIQVRT-SVQAMIQYAKKNGVAMVLVGHV 218 (479)
Q Consensus 190 svsQvre-~~~~L~~~AK~~~i~vilighv 218 (479)
T Consensus 182 --~~~r~~l~~~l~~l~~~~g~Tii~VTHD 209 (377)
T PRK11607 182 --KKLRDRMQLEVVDILERVGVTCVMVTHD 209 (377)
T ss_pred --HHHHHHHHHHHHHHHHHHCCEEEEECCC
T ss_conf --9999999999999999739999999989