HHsearch alignment for GI: 254780334 and conserved domain: PRK11614
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional.
Probab=97.75 E-value=0.0013 Score=45.81 Aligned_cols=136 Identities=16% Similarity=0.236 Sum_probs=70.9
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHH-HHHHHH-HHCCCCCCCHHEECC-----------
Q ss_conf 8578708999549875188999999999850398199998646304-788887-520157751000034-----------
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIG-QIRLRA-QRLNTINSSVYIAIE----------- 152 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~-Qi~~Ra-~Rl~~~~~~i~~~~e----------- 152 (479)
T Consensus 27 ~i~~Gei~~liG~NGaGKSTLl~~i~G~~~~~~G~-I~~~G~~i~~~~~~~~~r~~i~~vpq~~~~~~~ltv~enl~~~~ 105 (237)
T PRK11614 27 HINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGR-IVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGG 105 (237)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEE-EEECCEECCCCCHHHHHHHCEEEECCCCCCCCCCCHHHHHHHHC
T ss_conf 98699799998799975999999996799889628-99999988879989998706478355664577788999987510
Q ss_pred -----CC----HHHH---------------------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf -----78----8999---------------------------99997316982899721687665420445563679999
Q gi|254780334|r 153 -----TN----VEDI---------------------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRT 196 (479)
Q Consensus 153 -----~~----l~~i---------------------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre 196 (479)
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~LSgG~~Qrv~iAra-L~~~P~lLlLDEPt----~gLD-----~~~~~~ 175 (237)
T PRK11614 106 FFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRA-LMSQPRLLLLDEPS----LGLA-----PIIIQQ 175 (237)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-HHCCCCEEEEECCC----CCCC-----HHHHHH
T ss_conf 1378678999999999865555676544223489988599999999-85699999995975----5799-----999999
Q ss_pred HHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 999999975307978999863036654331145787753027851
Q gi|254780334|r 197 SVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 197 ~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 176 i~~~l~~l-~~~g~tii~vsH~--------l~~~~~~aDrv~vl~ 211 (237)
T PRK11614 176 IFDTIEQL-REQGMTIFLVEQN--------ANQALKLADRGYVLE 211 (237)
T ss_pred HHHHHHHH-HHCCCEEEEEECC--------HHHHHHHCCEEEEEE
T ss_conf 99999999-9679999999475--------899999699999997