HHsearch alignment for GI: 254780334 and conserved domain: PRK11629
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional.
Probab=97.71 E-value=0.00054 Score=48.69 Aligned_cols=138 Identities=22% Similarity=0.281 Sum_probs=72.6
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC----CHHH-HHHHHHHCCCCCCCHHEECC-CCHHH--
Q ss_conf 8578708999549875188999999999850398199998646----3047-88887520157751000034-78899--
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE----AIGQ-IRLRAQRLNTINSSVYIAIE-TNVED-- 157 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE----s~~Q-i~~Ra~Rl~~~~~~i~~~~e-~~l~~-- 157 (479)
T Consensus 31 ~i~~GE~v~iiG~sGsGKSTLl~~i~Gl~~p~~G~-I~~~g~~i~~~~~~~~~~~r~~~ig~v~Q~~~l~~~~tv~eni~ 109 (233)
T PRK11629 31 SIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGD-VIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVA 109 (233)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEE-EEECCEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHH
T ss_conf 98899899999999940999999996699998639-99999998869988999873797899916752377866999998
Q ss_pred -------------------H--------------------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHH
Q ss_conf -------------------9--------------------------9999731698289972168766542044556367
Q gi|254780334|r 158 -------------------I--------------------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVI 192 (479)
Q Consensus 158 -------------------i--------------------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~Gsvs 192 (479)
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSGGqkQRvaiAra-L~~~P~illlDEPT----s~LD-----~~ 179 (233)
T PRK11629 110 MPLLIGKKKPAEINSRALEMLKAVGLEHRANHRPSELSGGERQRVAIARA-LVNNPRLVLADEPT----GNLD-----AR 179 (233)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCEECHHHHHHHHHHHH-HHCCCCEEEEECCC----CCCC-----HH
T ss_conf 89998499999999989999987273667749846638999999999999-96599999992888----8799-----99
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEEC
Q ss_conf 99999999999753079789998630366543311457877530278515
Q gi|254780334|r 193 QVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFEG 242 (479)
Q Consensus 193 Qvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~eg 242 (479)
T Consensus 180 ~~~~i~~~l~~l~~~~g~tvi~vtHd--------l~~a~~~~r~i~m~dG 221 (233)
T PRK11629 180 NADSIFQLLGELNRLQGTAFLVVTHD--------LQLAKRMSRQLEMRDG 221 (233)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCC--------HHHHHHHCCEEEEECC
T ss_conf 99999999999999709899998689--------9999960989999799