HHsearch alignment for GI: 254780334 and conserved domain: PRK11831
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional.
Probab=97.89 E-value=0.00037 Score=49.89 Aligned_cols=137 Identities=22% Similarity=0.301 Sum_probs=76.6
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC----HHHHHHHHHHCCCCCCCHHEECCC--------
Q ss_conf 85787089995498751889999999998503981999986463----047888875201577510000347--------
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEA----IGQIRLRAQRLNTINSSVYIAIET-------- 153 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs----~~Qi~~Ra~Rl~~~~~~i~~~~e~-------- 153 (479)
T Consensus 30 ~i~~Gei~~iiGpnGsGKSTLlk~i~Gl~~p~~G~I-~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~l~~~ltv~eni~~ 108 (269)
T PRK11831 30 TVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEI-LFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAY 108 (269)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE-EECCEECCCCCHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHH
T ss_conf 887998999993999759999999967988898669-9999888765887899876146898537632678859999989
Q ss_pred ------------------------CHHHH-----------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHH
Q ss_conf ------------------------88999-----------------9999731698289972168766542044556367
Q gi|254780334|r 154 ------------------------NVEDI-----------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVI 192 (479)
Q Consensus 154 ------------------------~l~~i-----------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~Gsvs 192 (479)
T Consensus 109 ~l~~~~~~~~~~~~~~v~~~Le~~gL~~~~~~~~~~LSGGq~QRv~iAraL-~~~P~iLlLDEPt----sgLD-----~~ 178 (269)
T PRK11831 109 PLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAI-ALEPDLIMFDEPF----VGQD-----PI 178 (269)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHH-HCCCCEEEECCCC----CCCC-----HH
T ss_conf 999955899999999999999861765456388231899999999999999-7599999982875----6799-----99
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 9999999999975307978999863036654331145787753027851
Q gi|254780334|r 193 QVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 193 Qvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 179 ~~~~i~~li~~l~~~~g~TiiivtHd--------l~~v~~iaDrv~vl~ 219 (269)
T PRK11831 179 TMGVLVKLISELNSALGVTCVVVSHD--------VPEVLSIADHAWIVA 219 (269)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCC--------HHHHHHHCCEEEEEE
T ss_conf 99999999999998529899998649--------899998699999998