HHsearch alignment for GI: 254780334 and conserved domain: PRK12402
>PRK12402 replication factor C small subunit 2; Reviewed.
Probab=97.30 E-value=0.0016 Score=45.26 Aligned_cols=52 Identities=21% Similarity=0.285 Sum_probs=39.0
Q ss_pred CCEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 64031333455666323781248888659857870899954987518899999999985
Q gi|254780334|r 57 SLFMLSEESIEEESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLA 115 (479)
Q Consensus 57 ~~~~l~~~~~~~~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a 115 (479)
T Consensus 10 RP~~~~dvvGq~~i-----~~~L~~~~~~~~~ph--lLf~GPpG~GKTt~A~~lA~~l~ 61 (337)
T PRK12402 10 RPSLFEDILGQESV-----VDHLSALAASGNLPH--LVVYGPSGSGKTAAVRALARELY 61 (337)
T ss_pred CCCCHHHHCCCHHH-----HHHHHHHHHCCCCCE--EEEECCCCCCHHHHHHHHHHHHC
T ss_conf 88979980397999-----999999997799876--98889298489999999999967