HHsearch alignment for GI: 254780334 and conserved domain: PRK12608

Probab=96.73  E-value=0.033  Score=35.67  Aligned_cols=94  Identities=21%  Similarity=0.200  Sum_probs=55.5

Q ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC-EEEE-ECCCCHHHHHHHHHHCCCCCCCHHEE-----------CC
Q ss_conf             85787089995498751889999999998503981-9999-86463047888875201577510000-----------34
Q gi|254780334|r   86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHR-ITYV-SGEEAIGQIRLRAQRLNTINSSVYIA-----------IE  152 (479)
Q Consensus        86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~-vlYv-S~EEs~~Qi~~Ra~Rl~~~~~~i~~~-----------~e  152 (479)
T Consensus       128 PIGkGQRgLIVAPPkaGKT~LLq~IA~aI~~NhPev~livLLIDERPEEVTdm~-r-~v~gEVvaSTfD~~~~~h~~vAe  205 (379)
T PRK12608        128 PIGKGQRGLIVAPPRAGKTILLQQIAQAVAANHPDIHLMVLLIDERPEEVTDMK-R-SVKGEVYASTFDRPYDRHIRVAE  205 (379)
T ss_pred             CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH-H-HCCEEEEEECCCCCHHHHHHHHH
T ss_conf             634574012745898657899999999998579984899998168935888888-6-23707999779899899999999


Q ss_pred             CCHHHHHHHHHHCCCCCEEEECHHHHHHHH
Q ss_conf             788999999973169828997216876654
Q gi|254780334|r  153 TNVEDIIATLITNEKPDLVIIDSIQTLWSQ  182 (479)
Q Consensus       153 ~~l~~il~~~i~~~~~~~vVIDSIQtl~~~  182 (479)
T Consensus       206 l~ler-AkrlvE~G~dVvillDSiTRlaRA  234 (379)
T PRK12608        206 LVLER-AKRLVEEGKDVVILLDSLTRLARA  234 (379)
T ss_pred             HHHHH-HHHHHHCCCCEEEEECCHHHHHHH
T ss_conf             99999-999987699689996517788998