HHsearch alignment for GI: 254780334 and conserved domain: PRK12724

Probab=98.25  E-value=7.9e-05  Score=54.78  Aligned_cols=118  Identities=20%  Similarity=0.258  Sum_probs=75.9

Q ss_pred             CCCCCCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCCEEEEECCC----CHHHHHHHHHHCCCCCCCHHEECCCCHHHHH
Q ss_conf             9857870899954987518899999999985-0398199998646----3047888875201577510000347889999
Q gi|254780334|r   85 GGFVRGSVILVGGDPGIGKSTLLMQTAASLA-YKKHRITYVSGEE----AIGQIRLRAQRLNTINSSVYIAIETNVEDII  159 (479)
Q Consensus        85 GGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a-~~g~~vlYvS~EE----s~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il  159 (479)
T Consensus       218 ~~~~~~kvi~lVGPTGVGKTTTiAKLAA~~~l~~~kkVaLIT~DTYRIgAvEQLktYa~Il~iPv~v-----v~~~~el~  292 (432)
T PRK12724        218 TGKNQRKVVFFVGPTGSGKTTSIAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFYP-----VKDIKKFK  292 (432)
T ss_pred             CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEE-----EECHHHHH
T ss_conf             5777762999989999888999999999999974992799952665377999999999985994599-----51899999


Q ss_pred             HHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             999731698289972168766542044556367999999999997530797899986
Q gi|254780334|r  160 ATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVG  216 (479)
Q Consensus       160 ~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilig  216 (479)
T Consensus       293 ~al-~~~~~DlILIDTAG------r--S~rd~~~~~eL~~ll~~~~~~~~ie~~LVL  340 (432)
T PRK12724        293 ETL-ARDGSELILIDTAG------Y--SHRNLEQLERMQSFYSCFGEKDSVENLLVL  340 (432)
T ss_pred             HHH-HHCCCCEEEEECCC------C--CCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             999-85699999992999------8--978999999999999863667885179999