HHsearch alignment for GI: 254780334 and conserved domain: PRK12727

Probab=97.49  E-value=0.0022  Score=44.22  Aligned_cols=86  Identities=22%  Similarity=0.319  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHHC-CC-CCEEEEECCC----CHHHHHHHHHHCCCCCCCHHEECCCCHHHHH
Q ss_conf             8578708999549875188999999999850-39-8199998646----3047888875201577510000347889999
Q gi|254780334|r   86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAY-KK-HRITYVSGEE----AIGQIRLRAQRLNTINSSVYIAIETNVEDII  159 (479)
Q Consensus        86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~-~g-~~vlYvS~EE----s~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il  159 (479)
T Consensus       344 ~~~~gGv~AlvGpTGvGKTTT~aKlAa~~~~~~g~~~valit~DtyRiga~eQL~~y~~ilgvpv~~--~~~~~~l~~~l  421 (557)
T PRK12727        344 PLERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRVGGREQLHSYGRQLGIAVHE--ADSAESLLDLL  421 (557)
T ss_pred             HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEE--ECCHHHHHHHH
T ss_conf             1540764787437776731179999999999739981899972664087999999999983975798--28999999999


Q ss_pred             HHHHHCCCCCEEEECHH
Q ss_conf             99973169828997216
Q gi|254780334|r  160 ATLITNEKPDLVIIDSI  176 (479)
Q Consensus       160 ~~~i~~~~~~~vVIDSI  176 (479)
T Consensus       422 ~~---l~~~~lvliDTa  435 (557)
T PRK12727        422 ER---LRDYKLVLIDTA  435 (557)
T ss_pred             HH---HCCCCEEEEECC
T ss_conf             98---369998999499