HHsearch alignment for GI: 254780334 and conserved domain: PRK13341

>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed.

Probab=97.08  E-value=0.002  Score=44.48  Aligned_cols=57  Identities=25%  Similarity=0.231  Sum_probs=40.0

Q ss_pred             CCCCCEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             6656403133345566632378124888865985787089995498751889999999998
Q gi|254780334|r   54 HSISLFMLSEESIEEESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASL  114 (479)
Q Consensus        54 ~~~~~~~l~~~~~~~~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~  114 (479)
T Consensus        20 ~rmRP~~Lde~vGQ~h--llg~g~~Lrr~i~~~~~~--S~Il~GPPGtGKTTLA~iIA~~t   76 (726)
T PRK13341         20 DRLRPRTLEEFVGQDH--ILGEGRLLRRAIKADRVG--SLILYGPPGVGKTTLARIIANHT   76 (726)
T ss_pred             HHHCCCCHHHHCCCHH--HCCCCCHHHHHHHCCCCC--EEEEECCCCCCHHHHHHHHHHHH
T ss_conf             8629998777359575--428982899999769998--27888979999999999998874