HHsearch alignment for GI: 254780334 and conserved domain: PRK13640
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=97.80 E-value=0.0002 Score=51.80 Aligned_cols=137 Identities=20% Similarity=0.231 Sum_probs=75.6
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC--CCEEEEECCCCH-HHHHHHHHHCCCCCCC--HHEECCCCHHH---
Q ss_conf 857870899954987518899999999985039--819999864630-4788887520157751--00003478899---
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKK--HRITYVSGEEAI-GQIRLRAQRLNTINSS--VYIAIETNVED--- 157 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g--~~vlYvS~EEs~-~Qi~~Ra~Rl~~~~~~--i~~~~e~~l~~--- 157 (479)
T Consensus 30 ~I~~Ge~vaiiG~nGsGKSTL~~~l~Gll~P~~~~~G~i~~~g~~i~~~~~~~lr~~vg~VfQ~P~~q~~~~tV~e~iaf 109 (283)
T PRK13640 30 SIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPKSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAF 109 (283)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEECCCCCHHHHHHCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 99899999999999987999999996403788886179999999999679889962618998688761887829999984
Q ss_pred --------------H------------------------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHH
Q ss_conf --------------9------------------------------99997316982899721687665420445563679
Q gi|254780334|r 158 --------------I------------------------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQ 193 (479)
Q Consensus 158 --------------i------------------------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQ 193 (479)
T Consensus 110 gl~n~~~~~~e~~~~v~~~l~~vgl~~~~~~~p~~LSGGqkQRvaiA~-aLa~~P~iLllDEPTs~----LD-----~~~ 179 (283)
T PRK13640 110 GLENRGVPRPEMIKIVADVLSDVGMLDYIDSEPANLSGGQKQRVAIAG-ILAVEPQIIILDESTSM----LD-----PAG 179 (283)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHCCHHHHHHHHHHH-HHHCCCCEEEECCCCCC----CC-----HHH
T ss_conf 575379999999999999998779977764792229999999999999-99719999997687454----89-----899
Q ss_pred HHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 999999999975307978999863036654331145787753027851
Q gi|254780334|r 194 VRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 194 vre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 180 ~~~i~~~l~~l~~e~g~TvI~itHd~~--------~a~~-aDrv~vm~ 218 (283)
T PRK13640 180 KEQILKLIRKLMKDNNLTIISITHDID--------EAAG-ADQVLVLD 218 (283)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEECHH--------HHHH-CCEEEEEE
T ss_conf 999999999999706989999978878--------9970-99899999