HHsearch alignment for GI: 254780334 and conserved domain: PRK13849

>PRK13849 putative crown gall tumor protein VirC1; Provisional.
Probab=97.64  E-value=0.00078  Score=47.50  Aligned_cols=84  Identities=21%  Similarity=0.259  Sum_probs=55.5

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC--CHHHHHHHHHHCCCCCCCHHEECCCC---HHHHHHHHHHCC
Q ss_conf             8999549875188999999999850398199998646--30478888752015775100003478---899999997316
Q gi|254780334|r   92 VILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE--AIGQIRLRAQRLNTINSSVYIAIETN---VEDIIATLITNE  166 (479)
Q Consensus        92 ~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE--s~~Qi~~Ra~Rl~~~~~~i~~~~e~~---l~~il~~~i~~~  166 (479)
T Consensus         4 i~~~~~KGG~GKtT~a~~la~~~~~~g~~v~~iD~Dpq~s~~~W~e~a~~~~~~~~~~~v~~~~~~~~l~~~~e~-~~~~   82 (231)
T PRK13849          4 LTFCSFKGGAGKTTALMGLCAALASDGKRVALFEADENRPLTRWKENALRSNTWDPACEVYAADELPLLEAAYED-AELQ   82 (231)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHH-HHHC
T ss_conf             999618998769999999999999789959999689986889999876525898877523405652578999988-7536


Q ss_pred             CCCEEEECHH
Q ss_conf             9828997216
Q gi|254780334|r  167 KPDLVIIDSI  176 (479)
Q Consensus       167 ~~~~vVIDSI  176 (479)
T Consensus        83 ~~D~VIIDtp   92 (231)
T PRK13849         83 GFDYALADTH   92 (231)
T ss_pred             CCCEEEECCC
T ss_conf             9988998189