HHsearch alignment for GI: 254780334 and conserved domain: TIGR00368
>TIGR00368 TIGR00368 Mg chelatase homolog; InterPro: IPR004482 This family of bacterial proteins are variously described as 'hypothetical protein yifB', 'competence protein', 'hypothetical protein' or 'Mg chelatase-related protein'. These proteins are a subset of the magnesium chelatase, ChlI subunit family and either belong to or show significant homology to the non-peptidase homologs of the MEROPS peptidase family S16 (lon protease family, clan SF), IPR001984 from INTERPRO. .
Probab=99.84 E-value=6.3e-21 Score=172.23 Aligned_cols=158 Identities=22% Similarity=0.354 Sum_probs=135.6
Q ss_pred CCCCCEEEEEEEECCCCCCCCEEEEECCCH-------HHHHHHHHHHHHHCCCCCCCCHHHEECC-CCCCCCCCCCCHHH
Q ss_conf 897411553310115778772477604686-------6655558988751111024622210014-56111543258799
Q gi|254780334|r 306 GTRALLVEIQSLVVPTSLGMPRRTVVGWDS-------SRLAMILAVLEARCNIKFGNHDVHLNIA-GGYRISEPAADVAV 377 (479)
Q Consensus 306 G~r~~lvEvQALv~~~~~~~p~R~~~G~d~-------~rl~~llAvl~k~~~~~~~~~Di~~nv~-gG~~i~~pa~DLai 377 (479)
T Consensus 8 G~~a~~v~vEvdis~---G~pg~~~VGLp~~~vkEsreRVk---sAl-~Ns~F~fP~~rI~iNLAPAdl~KeG~~FDLpI 80 (505)
T TIGR00368 8 GVEAPLVTVEVDISK---GLPGITIVGLPETTVKESRERVK---SAL-KNSGFKFPAKRITINLAPADLPKEGGRFDLPI 80 (505)
T ss_pred CCCCCEEEEEEEECC---CCCCCEEECCCCCCHHHHHHHHH---HHH-HHCCCCCCCCEEEEECCCCCCCCCCCCCCHHH
T ss_conf 636403479887307---78721343388631056678999---998-61576688540166538888766788863389
Q ss_pred HHHHHHHHCCCC--CCCCEEEEEEEECCCEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHCC-CCCEEEEEECCHHHHH
Q ss_conf 999999724886--8878599987424731634078899999999769989997757653228-5880899838399999
Q gi|254780334|r 378 AAALISSILSIP--LPSDFVYFGEVSLSGSVRAVGHMQQRLKEAEKIGFLSGVFPESAKGECK-IGMLDRQYIKNLSDLV 454 (479)
Q Consensus 378 a~ailSs~~~~~--~~~~~~~~GEl~L~GeIR~V~~i~~ri~eA~~~G~~~~iiP~~n~~e~~-~~~i~i~~v~~l~e~i 454 (479)
T Consensus 81 AI~ilaaseq~da~~L~~yl~lGEL~LdG~lR~i~gvlP~~~~A~k~~~~~~iVp~~N~~EaSlv~G~~~y~~~~L~~vv 160 (505)
T TIGR00368 81 AIGILAASEQLDAKKLDEYLFLGELALDGKLRGIKGVLPAIALAQKSGRKFIIVPKENAEEASLVDGLNVYGADHLKEVV 160 (505)
T ss_pred HHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCEEHHHHHHHHH
T ss_conf 99999986333043144011001133247511045689999999865876776216675520266387402047489999
Q ss_pred HHHH--CCCCCCCCCCCC
Q ss_conf 9861--476433335432
Q gi|254780334|r 455 KKIT--ALQKKDKKTVHK 470 (479)
Q Consensus 455 ~~l~--~~~~~~~~~~~~ 470 (479)
T Consensus 161 ~fl~ql~~~~L~~~t~~~ 178 (505)
T TIGR00368 161 KFLEQLGSEKLPPRTNTK 178 (505)
T ss_pred HHHHHHCCCCCCCCCCCC
T ss_conf 999762310177754555