HHsearch alignment for GI: 254780334 and conserved domain: TIGR00750
>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=96.83 E-value=0.0017 Score=45.02 Aligned_cols=96 Identities=24% Similarity=0.391 Sum_probs=58.6
Q ss_pred HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHH-------HHHHHHHCC-----CCCCC
Q ss_conf 888865985787089995498751889999999998503981999986463047-------888875201-----57751
Q gi|254780334|r 79 LDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQ-------IRLRAQRLN-----TINSS 146 (479)
Q Consensus 79 LDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Q-------i~~Ra~Rl~-----~~~~~ 146 (479)
T Consensus 28 l~~i~p-~~GnA~~vG~TG~PGaGKSTl~~~l~~~lrRrG~~VaViAvDP~SPfTGGsiLGDr~Rm~~~asrkqlW~dPg 106 (333)
T TIGR00750 28 LERILP-KTGNAHVVGITGVPGAGKSTLVEKLIMELRRRGLKVAVIAVDPSSPFTGGSILGDRLRMQRLASRKQLWTDPG 106 (333)
T ss_pred HHHHHH-HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 998624-3279078766468888577799999899976597689998879759755145456887754422223322898
Q ss_pred HHEECC-C---------CHHHHHHHHHHCCCCCEEEECHH
Q ss_conf 000034-7---------88999999973169828997216
Q gi|254780334|r 147 VYIAIE-T---------NVEDIIATLITNEKPDLVIIDSI 176 (479)
Q Consensus 147 i~~~~e-~---------~l~~il~~~i~~~~~~~vVIDSI 176 (479)
T Consensus 107 ~FIRs~ptrG~lGGls~at~~~~-~lldA~G~DVI~vETV 145 (333)
T TIGR00750 107 VFIRSMPTRGSLGGLSKATRELV-KLLDAAGYDVILVETV 145 (333)
T ss_pred CEECCCCCCCCHHHHHHHHHHHH-HHHHHCCCCEEEEEEE
T ss_conf 56767766675257879999999-9998638987999841