HHsearch alignment for GI: 254780334 and conserved domain: TIGR01969
>TIGR01969 minD_arch cell division ATPase MinD; InterPro: IPR010224 Proper placement of the bacterial cell division site requires the site-specific inactivation of other potential division sites. In Escherichia coli, selection of the correct mid-cell site is mediated by the MinC, MinD and MinE proteins. Several members of this family are found in archaeal genomes but their function is uncharacterised. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. This entry represents the archaeal MinD family. The exact roles of the various archaeal MinD homologs are unknown. .
Probab=96.91 E-value=0.013 Score=38.55 Aligned_cols=143 Identities=19% Similarity=0.299 Sum_probs=91.3
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH--HHHHH------------------CCC-CCCCHHE
Q ss_conf 08999549875188999999999850398199998646304788--88752------------------015-7751000
Q gi|254780334|r 91 SVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIR--LRAQR------------------LNT-INSSVYI 149 (479)
Q Consensus 91 s~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~--~Ra~R------------------l~~-~~~~i~~ 149 (479)
T Consensus 2 ~I~iASGKGGtGKTT~tANLgVALA~~Gk~V~~~DADI~MANL~LiLgmE~~~VTLhDVLAGeA~i~DAIY~gp~GnV~V 81 (258)
T TIGR01969 2 IITIASGKGGTGKTTITANLGVALAKLGKKVLVLDADITMANLELILGMEDKPVTLHDVLAGEADIKDAIYEGPEGNVKV 81 (258)
T ss_pred EEEEEECCCCCCHHHEEEHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEE
T ss_conf 88999778898614000007788986097689994676677689884468889675221344561001100288984478
Q ss_pred EC------------CCCHHHHHHHHHHCCCCCEEEECHH--------HHHH---------HHHHCCCCCCHHHHHHHHHH
Q ss_conf 03------------4788999999973169828997216--------8766---------54204455636799999999
Q gi|254780334|r 150 AI------------ETNVEDIIATLITNEKPDLVIIDSI--------QTLW---------SQTAESSPGTVIQVRTSVQA 200 (479)
Q Consensus 150 ~~------------e~~l~~il~~~i~~~~~~~vVIDSI--------Qtl~---------~~~~~s~~GsvsQvre~~~~ 200 (479)
T Consensus 82 ~PagvSLEg~rKA~~~~L~dV~~~i~~--~~D~lLIDAPAGL~~~a~~Al~~a~elLLVvNPEi~SI-------tD-aLK 151 (258)
T TIGR01969 82 IPAGVSLEGLRKADPDKLEDVLKEIID--DTDFLLIDAPAGLERDAVTALAAADELLLVVNPEISSI-------TD-ALK 151 (258)
T ss_pred ECCCCCHHHCCCCCHHHHHHHHHHHHC--CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCHHHH-------HH-HHH
T ss_conf 506122100012683332899998720--43778874789833789999986186648667654467-------77-889
Q ss_pred HHHHHHH--CCCEEEEEEEECCCCCCCCHHHHHHHHHE-EEEEECC
Q ss_conf 9997530--79789998630366543311457877530-2785155
Q gi|254780334|r 201 MIQYAKK--NGVAMVLVGHVTKEGQIAGPRVIEHMVDA-VLYFEGG 243 (479)
Q Consensus 201 L~~~AK~--~~i~vilighvTK~G~iAGp~~LeH~VD~-vl~~ege 243 (479)
T Consensus 152 ~k~va~~lGt~ilG~vlNRv~~~~tel~~~eiE~iLevPVl~~vPE 197 (258)
T TIGR01969 152 VKIVAEKLGTAILGVVLNRVTRDKTELGREEIEAILEVPVLGVVPE 197 (258)
T ss_pred HHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECC
T ss_conf 9999876088324689960236666378889998847973898569