HHsearch alignment for GI: 254780334 and conserved domain: TIGR02173
>TIGR02173 cyt_kin_arch cytidylate kinase, putative; InterPro: IPR011892 Proteins in this family are believed to be cytidylate kinase. Members of this family are found in the archaea and in spirochaetes, and differ considerably from the common bacterial form of cytidylate kinase described by IPR003136 from INTERPRO.; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=96.98 E-value=0.0013 Score=45.82 Aligned_cols=44 Identities=32% Similarity=0.471 Sum_probs=34.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCC
Q ss_conf 89995498751889999999998503981999986463047888875201577
Q gi|254780334|r 92 VILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTIN 144 (479)
Q Consensus 92 ~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~ 144 (479)
T Consensus 2 ~I~ISGpPGSGktTvA~~lA~~Ls---l--~~iSa----G~iRelA~~~Gldl 45 (173)
T TIGR02173 2 IITISGPPGSGKTTVAKILAEKLS---L--KLISA----GDIRELAEKMGLDL 45 (173)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCC---C--CEECC----CHHHHHHHHCCCCH
T ss_conf 788735896864789999998639---8--31202----00788986429887