HHsearch alignment for GI: 254780334 and conserved domain: TIGR03015
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=98.09 E-value=2.8e-05 Score=58.05 Aligned_cols=129 Identities=20% Similarity=0.311 Sum_probs=76.0
Q ss_pred HHHHHCCCCC-CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC--CCHHHHHHHHHHCCCCCCCHHE-ECCCC
Q ss_conf 8888659857-870899954987518899999999985039819999864--6304788887520157751000-03478
Q gi|254780334|r 79 LDRVTGGGFV-RGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGE--EAIGQIRLRAQRLNTINSSVYI-AIETN 154 (479)
Q Consensus 79 LDrvLGGGl~-~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~E--Es~~Qi~~Ra~Rl~~~~~~i~~-~~e~~ 154 (479)
T Consensus 32 l~~L~~-~l~~~~g~~lltGe~GtGKTtllr~l~~~l~~~~~~~~~i~~~~l~~~~ll~~i~~~lg~~~~~~~~~~~~~~ 110 (269)
T TIGR03015 32 MAYLEY-GLSQREGFILITGEVGAGKTTLIRNLLKRLDQERVVAAKLVNTRVDAEDLLRMVAADFGLETEGRDKAALLRE 110 (269)
T ss_pred HHHHHH-HHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 999999-9964896599972998988999999998459345489997699999999999999985989889899999999
Q ss_pred HHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH--HHCCCEEEEEEEEC
Q ss_conf 899999997316982899721687665420445563679999999999975--30797899986303
Q gi|254780334|r 155 VEDIIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYA--KKNGVAMVLVGHVT 219 (479)
Q Consensus 155 l~~il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~A--K~~~i~vilighvT 219 (479)
T Consensus 111 l~~~L~~~~~~g~~~vliIDEAq~L~~~~Le-------~L----r~L~n~e~~~~~ll~iiL~Gqpe 166 (269)
T TIGR03015 111 LEDFLIEQFAAGKRALLVVDEAQNLTPELLE-------EL----RMLSNFQTDNAKLLQIFLVGQPE 166 (269)
T ss_pred HHHHHHHHHHCCCCEEEEEECHHHCCHHHHH-------HH----HHHHCCCCCCCCCEEEEEECCHH
T ss_conf 9999999996699469997242219999999-------99----99970135888704899957867