HHsearch alignment for GI: 254780334 and conserved domain: TIGR03375

>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=97.49  E-value=0.00085  Score=47.25  Aligned_cols=88  Identities=20%  Similarity=0.162  Sum_probs=41.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHEECC-CCCCCCCCCCCHHHH------HHHHHHHCCCCCCCCEEEEE
Q ss_conf             24776046866655558988751111024622210014-561115432587999------99999724886887859998
Q gi|254780334|r  326 PRRTVVGWDSSRLAMILAVLEARCNIKFGNHDVHLNIA-GGYRISEPAADVAVA------AALISSILSIPLPSDFVYFG  398 (479)
Q Consensus       326 p~R~~~G~d~~rl~~llAvl~k~~~~~~~~~Di~~nv~-gG~~i~~pa~DLaia------~ailSs~~~~~~~~~~~~~G  398 (479)
T Consensus       520 G~i~idg~~~~~~~--~~~~r~~i~~v~Q~~~lf~gTi~eNi~~~~~~~~~~~i~~a~~~a~l~~~I~~lp~g~~t~-i~  596 (694)
T TIGR03375       520 GSVLLDGVDIRQID--PADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQ-IG  596 (694)
T ss_pred             CEEEECCEECCCCC--HHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCE-EC
T ss_conf             87998985425499--9999730213576771107469999841699999999999999819799997185667877-46


Q ss_pred             EE--ECCCEEEEECCHHHHHHHHHHC
Q ss_conf             74--2473163407889999999976
Q gi|254780334|r  399 EV--SLSGSVRAVGHMQQRLKEAEKI  422 (479)
Q Consensus       399 El--~L~GeIR~V~~i~~ri~eA~~~  422 (479)
T Consensus       597 e~G~~LSg------GqrQri~lARAl  616 (694)
T TIGR03375       597 ERGRSLSG------GQRQAVALARAL  616 (694)
T ss_pred             CCCCCCCH------HHHHHHHHHHHH
T ss_conf             89994689------999999999999