HHsearch alignment for GI: 254780334 and conserved domain: TIGR03410
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=97.73 E-value=0.0015 Score=45.42 Aligned_cols=137 Identities=22% Similarity=0.303 Sum_probs=75.8
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHH-HHHHHHHH-CCCCCCCHHEECCCCH--------
Q ss_conf 8578708999549875188999999999850398199998646304-78888752-0157751000034788--------
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIG-QIRLRAQR-LNTINSSVYIAIETNV-------- 155 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~-Qi~~Ra~R-l~~~~~~i~~~~e~~l-------- 155 (479)
T Consensus 22 ~v~~Gei~~liGpNGaGKSTL~~~i~Gl~~p~-~G~I~~~G~~i~~~~~~~~~r~gig~v~Q~~~lf~~lTV~Enl~~~~ 100 (230)
T TIGR03410 22 EVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK-SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRLTVEENLLTGL 100 (230)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHCCCCCC-CEEEEECCEECCCCCHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf 99999799999999940999999997799999-54999999999999989999829599377742576788999999999
Q ss_pred -----------HHH---------------------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf -----------999---------------------------999973169828997216876654204455636799999
Q gi|254780334|r 156 -----------EDI---------------------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTS 197 (479)
Q Consensus 156 -----------~~i---------------------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~ 197 (479)
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~l~~~~~r~~~~LSGGq~Qrv~iAraL-~~~P~lLlLDEPt----~gL-----D~~~~~~i 170 (230)
T TIGR03410 101 AALPRRSRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARAL-VTRPKLLLLDEPT----EGI-----QPSIIKDI 170 (230)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHH-HCCCCEEEEECCC----CCC-----CHHHHHHH
T ss_conf 8749667889999999999999998385111999999999999999-6299889993852----269-----99999999
Q ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 99999975307978999863036654331145787753027851
Q gi|254780334|r 198 VQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 198 ~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 171 ~~~i~~l~~~~g~tvl~vtH~--------l~~~~~~adrv~vl~ 206 (230)
T TIGR03410 171 GRVIRRLRAEGGMAILLVEQY--------LDFARELADRYYVME 206 (230)
T ss_pred HHHHHHHHHCCCCEEEEEECC--------HHHHHHHCCEEEEEE
T ss_conf 999999997179899999088--------899999699999995