HHsearch alignment for GI: 254780334 and conserved domain: cd03213
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=97.81 E-value=0.00075 Score=47.65 Aligned_cols=142 Identities=18% Similarity=0.227 Sum_probs=77.8
Q ss_pred HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC-CCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHHH
Q ss_conf 888865985787089995498751889999999998503-9819999864630478888752015775100003478899
Q gi|254780334|r 79 LDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYK-KHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVED 157 (479)
Q Consensus 79 LDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~-g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~ 157 (479)
T Consensus 25 L~~-vs~~v~~Gei~~ilGpnGaGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~-~~~~~-~~~ig~v~Q~~~l~~~ltv~e 101 (194)
T cd03213 25 LKN-VSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPL-DKRSF-RKIIGYVPQDDILHPTLTVRE 101 (194)
T ss_pred EEC-CEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCEEC-CHHHH-HHEEEEECCCCCCCCCCCHHH
T ss_conf 888-388990881999998999519999999857777899628999999999-75784-312899846652377684999
Q ss_pred -H------------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE
Q ss_conf -9------------------999973169828997216876654204455636799999999999753079789998630
Q gi|254780334|r 158 -I------------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHV 218 (479)
Q Consensus 158 -i------------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighv 218 (479)
T Consensus 102 ~l~~~a~l~~LSgGqrqRv~iA~a-L~~~P~illlDEPT----sgLD~-----~~~~~i~~~l~~l~~-~g~tvi~~tH~ 170 (194)
T cd03213 102 TLMFAAKLRGLSGGERKRVSIALE-LVSNPSLLFLDEPT----SGLDS-----SSALQVMSLLRRLAD-TGRTIICSIHQ 170 (194)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHH-HHCCCCEEEEECCC----CCCCH-----HHHHHHHHHHHHHHH-CCCEEEEEECC
T ss_conf 999998726988899999999999-96399889994898----78898-----999999999999996-89899999588
Q ss_pred CCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 36654331145787753027851
Q gi|254780334|r 219 TKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 219 TK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 171 ~-------~~~~~~~~Drv~vl~ 186 (194)
T cd03213 171 P-------SSEIFELFDKLLLLS 186 (194)
T ss_pred C-------HHHHHHHCCEEEEEE
T ss_conf 8-------599999799999998