HHsearch alignment for GI: 254780334 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=97.79 E-value=0.00037 Score=49.91 Aligned_cols=40 Identities=28% Similarity=0.285 Sum_probs=28.7
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 85787089995498751889999999998503981999986
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSG 126 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~ 126 (479)
T Consensus 26 ~i~~G~~v~ivG~sGsGKSTLl~ll~gl~~p~~-G~I~i~g 65 (220)
T cd03245 26 TIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTS-GSVLLDG 65 (220)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHCCCCCCC-CEEEECC
T ss_conf 987999999999999859999999967254786-5899999