HHsearch alignment for GI: 254780334 and conserved domain: cd03255

>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=97.69  E-value=0.00044  Score=49.35  Aligned_cols=136  Identities=19%  Similarity=0.308  Sum_probs=75.8

Q ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC----CHHHH-HHHHHHCCCCCCCHHEECC--------
Q ss_conf             8578708999549875188999999999850398199998646----30478-8887520157751000034--------
Q gi|254780334|r   86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE----AIGQI-RLRAQRLNTINSSVYIAIE--------  152 (479)
Q Consensus        86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE----s~~Qi-~~Ra~Rl~~~~~~i~~~~e--------  152 (479)
T Consensus        26 ~i~~Ge~~~iiG~sGsGKTTll~~i~Gl~-~p~~G~I~~~g~~i~~~~~~~~~~~rr~~Ig~v~Q~~~L~~~ltV~eni~  104 (218)
T cd03255          26 SIEKGEFVAIVGPSGSGKSTLLNILGGLD-RPTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVE  104 (218)
T ss_pred             EECCCCEEEEECCCCCHHHHHHHHHHCCC-CCCCEEEEECCEECCCCCHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHH
T ss_conf             98699899999999986999999996699-99964999999998879989999986504789866752155643999999


Q ss_pred             -----------------------CCHHHH-----------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHH
Q ss_conf             -----------------------788999-----------------9999731698289972168766542044556367
Q gi|254780334|r  153 -----------------------TNVEDI-----------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVI  192 (479)
Q Consensus       153 -----------------------~~l~~i-----------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~Gsvs  192 (479)
T Consensus       105 ~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~LSGG~kQRv~iAra-L~~~P~llllDEPTs----~LD-----~~  174 (218)
T cd03255         105 LPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARA-LANDPKIILADEPTG----NLD-----SE  174 (218)
T ss_pred             HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHH-HHCCCCEEEEECCCC----CCC-----HH
T ss_conf             99998499989999999987676793788738876389999999999999-855999999818887----689-----99


Q ss_pred             HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf             9999999999975307978999863036654331145787753027851
Q gi|254780334|r  193 QVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE  241 (479)
Q Consensus       193 Qvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e  241 (479)
T Consensus       175 ~~~~i~~~l~~l~~~~~~tii~itHd--------~~~~~-~aDrv~~m~  214 (218)
T cd03255         175 TGKEVMELLRELNKEAGTTIVVVTHD--------PELAE-YADRIIELR  214 (218)
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEECCC--------HHHHH-HCCEEEEEE
T ss_conf             99999999999999629899998968--------89998-699899998