HHsearch alignment for GI: 254780334 and conserved domain: cd03259
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.64 E-value=0.0017 Score=45.09 Aligned_cols=136 Identities=15% Similarity=0.226 Sum_probs=74.5
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCC------------
Q ss_conf 85787089995498751889999999998503981999986463047888875201577510000347------------
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIET------------ 153 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~------------ 153 (479)
T Consensus 22 ~i~~Gei~~iiGpnGaGKSTl~~~i~G-l~~p~~G~I~~~g~~i-~~~~~~~r~ig~v~Q~~~l~~~ltv~enl~~~~~~ 99 (213)
T cd03259 22 TVEPGEFLALLGPSGCGKTTLLRLIAG-LERPDSGEILIDGRDV-TGVPPERRNIGMVFQDYALFPHLTVAENIAFGLKL 99 (213)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHC-CCCCCCEEEEECCEEC-CCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 988998999999999739999999975-9998970899999998-88997787869990698658898199999889987
Q ss_pred -------------------CHHH-----------------HHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf -------------------8899-----------------9999973169828997216876654204455636799999
Q gi|254780334|r 154 -------------------NVED-----------------IIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTS 197 (479)
Q Consensus 154 -------------------~l~~-----------------il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~ 197 (479)
T Consensus 100 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGG~kQrv~iAra-L~~~P~illlDEPt----~gLD-----~~~~~~i 169 (213)
T cd03259 100 RGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARA-LAREPSLLLLDEPL----SALD-----AKLREEL 169 (213)
T ss_pred CCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHH-HCCCCCEEEECCCC----CCCC-----HHHHHHH
T ss_conf 599989999999999998699647637703389899999999876-22799999983986----4379-----9999999
Q ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 99999975307978999863036654331145787753027851
Q gi|254780334|r 198 VQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 198 ~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 170 ~~li~~l~~~~g~tii~vtHd--------l~~~~~~~dri~vm~ 205 (213)
T cd03259 170 REELKELQRELGITTIYVTHD--------QEEALALADRIAVMN 205 (213)
T ss_pred HHHHHHHHHHCCCEEEEECCC--------HHHHHHHCCEEEEEE
T ss_conf 999999999629999999689--------999999699999998