HHsearch alignment for GI: 254780334 and conserved domain: cd03259

>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.64  E-value=0.0017  Score=45.09  Aligned_cols=136  Identities=15%  Similarity=0.226  Sum_probs=74.5

Q ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCC------------
Q ss_conf             85787089995498751889999999998503981999986463047888875201577510000347------------
Q gi|254780334|r   86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIET------------  153 (479)
Q Consensus        86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~------------  153 (479)
T Consensus        22 ~i~~Gei~~iiGpnGaGKSTl~~~i~G-l~~p~~G~I~~~g~~i-~~~~~~~r~ig~v~Q~~~l~~~ltv~enl~~~~~~   99 (213)
T cd03259          22 TVEPGEFLALLGPSGCGKTTLLRLIAG-LERPDSGEILIDGRDV-TGVPPERRNIGMVFQDYALFPHLTVAENIAFGLKL   99 (213)
T ss_pred             EECCCCEEEEECCCCCHHHHHHHHHHC-CCCCCCEEEEECCEEC-CCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf             988998999999999739999999975-9998970899999998-88997787869990698658898199999889987


Q ss_pred             -------------------CHHH-----------------HHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             -------------------8899-----------------9999973169828997216876654204455636799999
Q gi|254780334|r  154 -------------------NVED-----------------IIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTS  197 (479)
Q Consensus       154 -------------------~l~~-----------------il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~  197 (479)
T Consensus       100 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGG~kQrv~iAra-L~~~P~illlDEPt----~gLD-----~~~~~~i  169 (213)
T cd03259         100 RGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARA-LAREPSLLLLDEPL----SALD-----AKLREEL  169 (213)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHH-HCCCCCEEEECCCC----CCCC-----HHHHHHH
T ss_conf             599989999999999998699647637703389899999999876-22799999983986----4379-----9999999


Q ss_pred             HHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf             99999975307978999863036654331145787753027851
Q gi|254780334|r  198 VQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE  241 (479)
Q Consensus       198 ~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e  241 (479)
T Consensus       170 ~~li~~l~~~~g~tii~vtHd--------l~~~~~~~dri~vm~  205 (213)
T cd03259         170 REELKELQRELGITTIYVTHD--------QEEALALADRIAVMN  205 (213)
T ss_pred             HHHHHHHHHHCCCEEEEECCC--------HHHHHHHCCEEEEEE
T ss_conf             999999999629999999689--------999999699999998