HHsearch alignment for GI: 254780334 and conserved domain: pfam00004
>pfam00004 AAA ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Probab=97.73 E-value=0.00049 Score=48.99 Aligned_cols=73 Identities=26% Similarity=0.433 Sum_probs=45.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHCCCCCEEE
Q ss_conf 99954987518899999999985039819999864630478888752015775100003478899999997316982899
Q gi|254780334|r 93 ILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNEKPDLVI 172 (479)
Q Consensus 93 ~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~~~~~~vV 172 (479)
T Consensus 1 iLl~GppGtGKT~~a~~la~~~---~~~~~~v~~~~~~------~~~~g--------~~~~~i~~~f~~-a~~~~p~Il~ 62 (131)
T pfam00004 1 LLLYGPPGTGKTTLAKAVAKEL---GAPFIEISGSELV------SKYVG--------ESEKRLRELFEA-AKKLAPCVIF 62 (131)
T ss_pred CEEECCCCCCHHHHHHHHHHHH---CCCCEECCCCCCC------CCCCC--------HHHHHHHHHHHH-HHHCCCCEEE
T ss_conf 9878999999999999999997---8985332420122------23345--------068889999999-9974991898
Q ss_pred ECHHHHHHHHH
Q ss_conf 72168766542
Q gi|254780334|r 173 IDSIQTLWSQT 183 (479)
Q Consensus 173 IDSIQtl~~~~ 183 (479)
T Consensus 63 iDe~d~l~~~~ 73 (131)
T pfam00004 63 IDEIDALAGSR 73 (131)
T ss_pred ECHHHHHHCCC
T ss_conf 31167775167