HHsearch alignment for GI: 254780334 and conserved domain: pfam05362
>pfam05362 Lon_C Lon protease (S16) C-terminal proteolytic domain. The Lon serine proteases must hydrolyse ATP to degrade protein substrates. In Escherichia coli, these proteases are involved in turnover of intracellular proteins, including abnormal proteins following heat-shock. The active site for protease activity resides in a C-terminal domain. The Lon proteases are classified as family S16 in Merops.
Probab=99.89 E-value=1.9e-22 Score=183.33 Aligned_cols=181 Identities=20% Similarity=0.361 Sum_probs=147.9
Q ss_pred CCCEEECCHHHHHHCCC-CCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEC----CCHHHHHHHHHHHHHHC
Q ss_conf 66311014045551147-66767348997304897411553310115778772477604----68666555589887511
Q gi|254780334|r 275 KGLQEVSDPSKIFLSDR-DSTSPGTAVFAGIEGTRALLVEIQSLVVPTSLGMPRRTVVG----WDSSRLAMILAVLEARC 349 (479)
Q Consensus 275 ~Gl~~v~~ps~~fl~~~-~~~~~Gs~v~~~~eG~r~~lvEvQALv~~~~~~~p~R~~~G----~d~~rl~~llAvl~k~~ 349 (479)
T Consensus 5 ~~l~~~lG~~~~~~~~~~~~~~iG~vnGLa~t~~GG~il~IE~~~~~g---~g~l~lTG~lg~vmkES~~~A~s~~ks~~ 81 (205)
T pfam05362 5 KNLEKYLGVPRFRYEEAEKEDQVGVVTGLAWTEVGGDLLTIEATIMPG---KGKLTLTGQLGDVMKESAQAALSYVRSRA 81 (205)
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 899996599767775344689871999989927997889999999558---88400347557899999999999999999
Q ss_pred ---CC---CCCCCHHHEECC-CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHC
Q ss_conf ---11---024622210014-56111543258799999999724886887859998742473163407889999999976
Q gi|254780334|r 350 ---NI---KFGNHDVHLNIA-GGYRISEPAADVAVAAALISSILSIPLPSDFVYFGEVSLSGSVRAVGHMQQRLKEAEKI 422 (479)
Q Consensus 350 ---~~---~~~~~Di~~nv~-gG~~i~~pa~DLaia~ailSs~~~~~~~~~~~~~GEl~L~GeIR~V~~i~~ri~eA~~~ 422 (479)
T Consensus 82 ~~~~~~~~~~~~~diHih~p~Ga~pkDGPSAGiai~~Ai~S~l~~~pV~~~iAmTGEIsL~G~VlpIGGv~eKi~aA~ra 161 (205)
T pfam05362 82 EELGIDPDFFEKKDIHIHVPEGATPKDGPSAGVTMATALVSALTGIPVRKDVAMTGEITLRGRVLPIGGLKEKLLAAHRA 161 (205)
T ss_pred HHHCCCCCHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEEECCHHHHHHHHHHH
T ss_conf 98089932466145999724666677776303899999999994887678879960331356799848999999999993
Q ss_pred CCCEEEECHHHHHHCC------CCCEEEEEECCHHHHHHHHH
Q ss_conf 9989997757653228------58808998383999999861
Q gi|254780334|r 423 GFLSGVFPESAKGECK------IGMLDRQYIKNLSDLVKKIT 458 (479)
Q Consensus 423 G~~~~iiP~~n~~e~~------~~~i~i~~v~~l~e~i~~l~ 458 (479)
T Consensus 162 Gik~ViiP~~N~~dl~~ip~~i~~~i~i~~V~~i~evl~~al 203 (205)
T pfam05362 162 GIKTVIIPKENEKDLEEIPENVREGLEIIPVEHVDEVLKHAL 203 (205)
T ss_pred CCCEEEECHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHH
T ss_conf 998899747776679983499976999999693999999974