HHsearch alignment for GI: 254780334 and conserved domain: pfam07088

>pfam07088 GvpD GvpD gas vesicle protein. This family consists of several archaeal GvpD gas vesicle proteins. GvpD is thought to be involved in the regulation of gas vesicle formation.
Probab=98.95  E-value=1.7e-08  Score=81.51  Aligned_cols=161  Identities=20%  Similarity=0.292  Sum_probs=107.0

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH-HHH---------CCCCCCCHH-------EE
Q ss_conf             7870899954987518899999999985039819999864630478888-752---------015775100-------00
Q gi|254780334|r   88 VRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLR-AQR---------LNTINSSVY-------IA  150 (479)
Q Consensus        88 ~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~R-a~R---------l~~~~~~i~-------~~  150 (479)
T Consensus         8 ~~G~tLlIkG~PGTGKTlfTl~~Ld~l~~~-~~vlYvStRvdqd~V~e~yf~~~~~~~~t~ilD~~qD~f~l~~~~~vP~   86 (484)
T pfam07088         8 DFGKTLLINGAPGTGKTLFTIRGLDVLRRH-HDVLYVSTRVDQETVHEMYFEGHGSLDKTAILDLLQDPFILPTDVDVPF   86 (484)
T ss_pred             CCCCEEEEECCCCCCCEEEEEEHHHHHHCC-CCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHCCCCCCCCC
T ss_conf             998479993699987238985737788516-9769996323778887740200255575665453026010631113665


Q ss_pred             CCCCHHHHHHHHHHCC----CCCEEEECHHHHHHHH---HHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
Q ss_conf             3478899999997316----9828997216876654---20445563679999999999975307978999863036654
Q gi|254780334|r  151 IETNVEDIIATLITNE----KPDLVIIDSIQTLWSQ---TAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQ  223 (479)
Q Consensus       151 ~e~~l~~il~~~i~~~----~~~~vVIDSIQtl~~~---~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK~G~  223 (479)
T Consensus        87 ~~l~l~sl~e~-vd~i~a~~er~~Ia~DSW~~i~eyLa~r~d~pe~----f~~~~n~lv~lar~~g~~Li~v~------E  155 (484)
T pfam07088        87 EKLNLDSLLEW-VDAINAAGERLTIAFDSWELIYEYLAERHDIPPD----ILTVTNQLVALARGSGARLVLVL------E  155 (484)
T ss_pred             CCCCHHHHHHH-HHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCHH----HHHHHHHHHHHHHHCCCEEEEEE------E
T ss_conf             42355579999-9876412457479983289999987776168466----75666567776652594599998------2


Q ss_pred             CCCHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEEEC
Q ss_conf             3311457877530278515556665442156763202
Q gi|254780334|r  224 IAGPRVIEHMVDAVLYFEGGTRNTQYDYRILRSVKNR  260 (479)
Q Consensus       224 iAGp~~LeH~VD~vl~~ege~~~~~~~~R~Lr~~KNR  260 (479)
T Consensus       156 ~~~~~~LeYivDGVVtL~vk~d~~GR~~R~L~LeKLR  192 (484)
T pfam07088       156 TAQNSRLEYIVDGVVTLNVKNDERGRTRRSLRLEKLR  192 (484)
T ss_pred             CCCCCCCHHEEEEEEEEEEEECCCCCEEEEEEHHHHC
T ss_conf             3667751212303899988625678376776723422